Gene Information

Name : sctQ (PAU_01049)
Accession : YP_003039886.1
Strain : Photorhabdus asymbiotica ATCC 43949
Genome accession: NC_012962
Putative virulence/resistance : Virulence
Product : type iii secretion component protein sctq
Function : -
COG functional category : N : Cell motility
COG ID : COG1886
EC number : -
Position : 1196270 - 1197199 bp
Length : 930 bp
Strand : -
Note : -

DNA sequence : 
ATGAATAGCCTGACCTTACCTAAAGTCTCATTAGAAGAATTGACCTTGCGTCAGACCCTAAGTCATTATCAGCAACAATT
TAGCTGGGTTAATGGTCACCTCTCACTTGATGTCGTCTCCCCTCCCCAAACGCTGGACAGAGTATTGCTGGCCCACTGGA
AAGGACATACATTCTCTTTTTATTGCCATGCAGCTGAACTGGCCCTGTGGCTCGCTCCTGATCTGCAACAAGCAGACTTA
TCCTCACTTCCTCAGGATCTATTACTATCATTGCTGGAATACCAGAGTAAGATGCTATCTGATCTATCATGGTCAGCACT
ACGTACTACATCAGCCCCCTCTTCATCAGCCTGCGTACTACTGCGTTTTGAGCGACAAGGTGCCACATTACCGCTCTGGT
TAACAGAACCCTCTCCCCTACTTGCTATATTGCCCAAACGTCAACCGGGGGAGTACCTGACCATTCCATTACTCCTTTCT
TTACAATGGGGAGCGATAAACCTGACCTTAAACGAATTTCGCACCTTGGAATCCGGGGATGTATTGCTACTGCCTCCCCA
ACAGCAACCAGATACTCCTCTGTTAGGGTATCTGGAAGGACACCCTTGGGCCTACTTTAAATACCATGAACATAAACTGG
AGTTAATCACTATGCATACACTCTCTTCTGACAGTCCCAACAGCACTTCACCAGTACCGGACTTAAACAGCTTAGAGATT
CATGTTAGTTTTGAAGTAGGTCGCCAGACTCTGGATTTACATACACTCACTAGTCTACAACCCGGTTCATTACTCGATCT
TGGCGTCCCGCCAGATGGTGAAGTACGTATTCTCGTCAATCAAAAGTGTCTCGGCTCAGGGCGGCTGGTGGATATTCAGG
GACGCCTGGGAGTCAGAGTTGAACGCCTTGCTATGGAGAAAGAATCATGA

Protein sequence : 
MNSLTLPKVSLEELTLRQTLSHYQQQFSWVNGHLSLDVVSPPQTLDRVLLAHWKGHTFSFYCHAAELALWLAPDLQQADL
SSLPQDLLLSLLEYQSKMLSDLSWSALRTTSAPSSSACVLLRFERQGATLPLWLTEPSPLLAILPKRQPGEYLTIPLLLS
LQWGAINLTLNEFRTLESGDVLLLPPQQQPDTPLLGYLEGHPWAYFKYHEHKLELITMHTLSSDSPNSTSPVPDLNSLEI
HVSFEVGRQTLDLHTLTSLQPGSLLDLGVPPDGEVRILVNQKCLGSGRLVDIQGRLGVRVERLAMEKES

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
lscQ AAO18041.1 LscQ Virulence TTSS locus Protein 1e-99 81

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
sctQ YP_003039886.1 type iii secretion component protein sctq VFG0393 Protein 1e-55 49
sctQ YP_003039886.1 type iii secretion component protein sctq VFG0189 Protein 2e-46 47