Gene Information

Name : rhaS (PAU_01040)
Accession : YP_003039877.1
Strain : Photorhabdus asymbiotica ATCC 43949
Genome accession: NC_012962
Putative virulence/resistance : Virulence
Product : similar to the transcriptional activator protein exsa/virf
Function : -
COG functional category : K : Transcription
COG ID : COG2207
EC number : -
Position : 1189021 - 1189839 bp
Length : 819 bp
Strand : -
Note : -

DNA sequence : 
ATGAACGGCATCACAACATCAGGGAAAGGAATGGATATTACTCTATTCCAGAGTAGTATGCCTGCCTTCAACGTTATAGA
GCATCATCAGGAAGGGATATATATCCTGCTCGAAGGCGAAATGACATGGCAGGACAGCACCAATAGCTACGACATCTCCC
ATAACGAGCTGCTTTTTGTTCGTCGTGGCAGTTATGTAGCAAAAACTCGTAGTGATACTTGTAAGCTACTTTGGTTGCCC
CTAAGTACACCTTTTCTTCACGGTTTTCTGCAACGTTTTGGTACTCTACTTAGTGAAGTCGAGCGGCACAATGTACCCGC
CCCCGAATTGATTGCATTTACCTCATCTCCTCTATTGTCTCAAAGTATTAACGGTCTGGTCGATTTATTGGCTCATGATT
ACCCCACAGCTTTGGGCCAGCTAAGAACGGAAGAATTGGTATTGTTGATGGCATTCGGGGAGCAAGGTGCGTTGCTCATG
TCAGTATTACGGCAATTGAGCAATCGTCAGGTAGAACGTTTGCAGATCTTTATGGAAAATCACTACCTCAAAGAGTGGAA
GCTCAGCGAATTCGCTAAGGAATTCGGTATGGGACTAACCACTTTCAAGGAATTGTTCCGTTCTGTATACGGAATATCAC
CACGAGCTTGGATCAGTGAGCGCCGTATTCTTTATGCACACCAGTTACTACTCAATAGCGAAATGAGTATTGTTGATATC
TCTATGGAAGCTGGATTCTCCAGCCAATCCTATTTTACTCAAAGCTACCGACGGCGTTTCGATTGCACACCCAGTCGGGC
TAGGTATGGCAAAGAGTAA

Protein sequence : 
MNGITTSGKGMDITLFQSSMPAFNVIEHHQEGIYILLEGEMTWQDSTNSYDISHNELLFVRRGSYVAKTRSDTCKLLWLP
LSTPFLHGFLQRFGTLLSEVERHNVPAPELIAFTSSPLLSQSINGLVDLLAHDYPTALGQLRTEELVLLMAFGEQGALLM
SVLRQLSNRQVERLQIFMENHYLKEWKLSEFAKEFGMGLTTFKELFRSVYGISPRAWISERRILYAHQLLLNSEMSIVDI
SMEAGFSSQSYFTQSYRRRFDCTPSRARYGKE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
lscA AAO18036.1 LscA Virulence TTSS locus Protein 2e-119 96

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
rhaS YP_003039877.1 similar to the transcriptional activator protein exsa/virf VFG0208 Protein 6e-89 64
rhaS YP_003039877.1 similar to the transcriptional activator protein exsa/virf VFG0399 Protein 3e-81 61