Gene Information

Name : sctB (PAU_01038)
Accession : YP_003039875.1
Strain : Photorhabdus asymbiotica ATCC 43949
Genome accession: NC_012962
Putative virulence/resistance : Virulence
Product : type iii secretion component protein sctb
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1187632 - 1188054 bp
Length : 423 bp
Strand : -
Note : -

DNA sequence :

ATGCAAACTCTACTCAACCATTTGGCCAGTCGCTTGGGCCAGAAGCTTTTTGTTCCCGATAGACAAGGGCACTATCATCT
ACACATTGATAACTACAACCTGTTTCTGCGCCAACAGGGAACCGAATTTGTATTATCCAGCCCACTAAACTGGCGTCATA
ACCTACAAGATCAAACAAGTACTGAATCACTAAAAATATTGCTTCAACAAGTCACTCGATGGGGACGCTATGCCCCTCAA
GCAATAGTCTTGGATGAATCAGAGAATCTTATTCTGGAAGCACGTCTTGCTCATGACAGTCTGGATGTTCAAATACTGGA
GCAGATGATAGGCATACATATCGATCTATTGGAACAGGTAATAACTTTATTATCAGAAACTCAATCTGCTCCGCAATGGA
AACAGGTAATATGGCAGCCATGA

Protein sequence :

MQTLLNHLASRLGQKLFVPDRQGHYHLHIDNYNLFLRQQGTEFVLSSPLNWRHNLQDQTSTESLKILLQQVTRWGRYAPQ
AIVLDESENLILEARLAHDSLDVQILEQMIGIHIDLLEQVITLLSETQSAPQWKQVIWQP

• Homologs from PAI DB

Gene	GenBank Accn	Product	Virulance or Resistance	PAI or REI	Alignment Type	E-val	Identity
lscB	AAO18034.1	LscB	Virulence	TTSS locus	Protein	2e-50	82

• Homologs from VFDB (virulence genes)

Gene	GenBank Accn	Product	ID of source DB	Alignment Type	E-val	Identity
sctB	YP_003039875.1	type iii secretion component protein sctb	VFG0210	Protein	1e-20	41