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Name : sctC (PAU_01037) Accession : YP_003039874.1 Strain : Photorhabdus asymbiotica ATCC 43949 Genome accession: NC_012962 Putative virulence/resistance : Virulence Product : type iii secretion outer membrane protein pscc Function : - COG functional category : N : Cell motility COG ID : COG1450 EC number : - Position : 1185788 - 1187644 bp Length : 1857 bp Strand : - Note : - DNA sequence : ATGGCAGCCATGAAACAGTTCCAACGGCTGTGCCGTTACTTACTGTTATCGTTGAGTATCAGCACTATGATACTTCCCTC TGCGTTTAGCCAGGATCTAGACTGGTTGCCTACGCCTTATAACTATTTGGCTAAAGGAGAAAGTTTACGGGATGTCCTGG TTAATTTTGGTGCTAACTATGAAGCATCAGTGATTGTCAGTGATAAGGTGACCGATCAGGTTAGTGGTCATTTCGAACAC GAAGGGCCTCAGGAATTCCTGCAACACTTATCCTCTCTCTATAATCTGGTCTGGTATTATGATGGCAGTGTGCTTTATGT ATTCAAAAATAGCGAAATACAATCGCGTCTCCTTAAGCTTGAGCAGACCAACGCAACAGAGTTAAAACAGGTTCTGAAAC GTGCCGGCATCTGGGAATCACGCTTTGGCTGGCGCCCTGACTCAAACAACCAACTAGTTTATGTATCTGGTCCTCCCCGC TATCTTGAGCTGGTCGATCAAACTGCATCTGCATTGGAACAGCAGTCACTACTACGTAGCGAAAAAACGGGCGCATTAAC AATAGAAATTTTCCCACTTAAATATGCTTCAGTTGTCGATCGCAAGATCCAGTATCGTGATACCAATATTGAAGCGCCTG GCATAGCCACCGTCCTCTCCCGCCTGCTTAGTGATGCCAATGTGACAACTGTCACGGGTGAAATGTCCTCATCTACGGGA GGAAACCACTCAAGTCGTGCTGTCATACAGGCAGAACCCTCTCTAAACGCAATCATTGTACGGGACAATCCTGAAAGGAT GTCCATGTATACACATTTGATTAACGCACTGGATAAGCCATCAGCGCGTATTGAAGTTGCCCTCTCCATCGTTGACATCA ATGCTGACAATCTTTCAGAGTTAGGCGTTGACTGGCAGGTAGGTATCAATACTGGACCACGCCATATAATTGATATCACA ACCTCAGCCAGAGAAAAGGAAAAGGAGAAGAACGGAGGAAAAGGCGAAAGCATCGGTTCAACTGCATTGGGTAGTTTAGT TGACCGCCGTGGTCTGGATTATCTGTTAGCCAAAATAACCTTATTAGAAAGCAAAGGCAGTGCTCAGGTAGTTTCCCGCC CGACACTACTCACTCAGGAGAACACTCAAGCAGTTATTGATCACAATGAAACCTATTACGTAAAAGTTGAAGGTGAACGG GTTGCTGAGCTTAAGAGTCTTACCTATGGCACCATGCTACGCATGACCCCCAGAGTCATCAAAATAGGCGATACCCCCGA AATCAGTTTAAACCTGCATATTGAGGATGGTAATCAGAAGCCGAACAGTTCAGGCTTAGGGGGCATACCTACAATTAACC GAACCATTGTCGATACAGTTGCCCGGGTTGGGCATGGTCAAAGCCTGCTGATCGGCGGCATTTATCGTGATGAGATGAGT GAAACTGTACGCAAGGTGCCATTTTTAGGCGATATTCCTTACCTAGGCGTATTGTTCCGCACTACCACTGAGCAAGTTAG ACGATCAGTACGACTGTTCATTATTGAGCCACGGCTAATTGATAGTGGAGTGGCCAATTATCTGGCTCTGGGTAACGGCC AAGACCTACGTACCGGATTACTGGCGACACAAGATATCTCTAATCAGAGCATTTCTCTGAGTAAAGCACTGAGTAGTGCA CAATGCCAACCATTATCCTCAGCCCGTCAAATGCAAGAAACATTACGACAAGCGGGTAAAAGCTCATTTCTGACTTCATG CCGAATGGGTAACGTTTATGGATGGCGCATCATCGAACAACAATGTTCACTTAAGGATACTTGGTGTGTTCGTGCACAAA ACAAGGCGAGCAAATGA Protein sequence : MAAMKQFQRLCRYLLLSLSISTMILPSAFSQDLDWLPTPYNYLAKGESLRDVLVNFGANYEASVIVSDKVTDQVSGHFEH EGPQEFLQHLSSLYNLVWYYDGSVLYVFKNSEIQSRLLKLEQTNATELKQVLKRAGIWESRFGWRPDSNNQLVYVSGPPR YLELVDQTASALEQQSLLRSEKTGALTIEIFPLKYASVVDRKIQYRDTNIEAPGIATVLSRLLSDANVTTVTGEMSSSTG GNHSSRAVIQAEPSLNAIIVRDNPERMSMYTHLINALDKPSARIEVALSIVDINADNLSELGVDWQVGINTGPRHIIDIT TSAREKEKEKNGGKGESIGSTALGSLVDRRGLDYLLAKITLLESKGSAQVVSRPTLLTQENTQAVIDHNETYYVKVEGER VAELKSLTYGTMLRMTPRVIKIGDTPEISLNLHIEDGNQKPNSSGLGGIPTINRTIVDTVARVGHGQSLLIGGIYRDEMS ETVRKVPFLGDIPYLGVLFRTTTEQVRRSVRLFIIEPRLIDSGVANYLALGNGQDLRTGLLATQDISNQSISLSKALSSA QCQPLSSARQMQETLRQAGKSSFLTSCRMGNVYGWRIIEQQCSLKDTWCVRAQNKASK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| lscC | AAO18033.1 | LscC | Virulence | TTSS locus | Protein | 0.0 | 88 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| sctC | YP_003039874.1 | type iii secretion outer membrane protein pscc | VFG0211 | Protein | 0.0 | 67 |
| sctC | YP_003039874.1 | type iii secretion outer membrane protein pscc | VFG0402 | Protein | 0.0 | 66 |
