Gene Information

Name : sctF (PAU_01035)
Accession : YP_003039872.1
Strain : Photorhabdus asymbiotica ATCC 43949
Genome accession: NC_012962
Putative virulence/resistance : Virulence
Product : type iii secretion component protein sctf
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1184043 - 1184366 bp
Length : 324 bp
Strand : -
Note : -

DNA sequence : 
ATGCTATCCAAGCTGCAATTACAATACTTAATGCAACAGAAGGAGACAATCATGTCTGGAGCAGATGCTAGCACTAAAAT
TTTTACTTCCGCAGAGACAGTAAATACACTTGATAAAGTTGCTAATCAATTAAGCACACAAGCTAACGCAGCCAACAAAA
ACGTCAATGACGCAATCACCGCCCTCAAAGACGGTCCTGATAACCCCGCATTACTGGCTGAATTGCAACACACGATTAAC
AAGTGGTCAGTCATCTACAACATTAACTCCACTGTCACCCGGTCCATGAAAGACCTGATGCAGGGCATATTACAGAAGAT
CTAA

Protein sequence : 
MLSKLQLQYLMQQKETIMSGADASTKIFTSAETVNTLDKVANQLSTQANAANKNVNDAITALKDGPDNPALLAELQHTIN
KWSVIYNINSTVTRSMKDLMQGILQKI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
lscF AAO18031.1 LscF Virulence TTSS locus Protein 1e-32 80

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
sctF YP_003039872.1 type iii secretion component protein sctf VFG0214 Protein 6e-22 73
sctF YP_003039872.1 type iii secretion component protein sctf VFG0405 Protein 3e-23 70