Gene Information

Name : sctH (PAU_01033)
Accession : YP_003039870.1
Strain : Photorhabdus asymbiotica ATCC 43949
Genome accession: NC_012962
Putative virulence/resistance : Virulence
Product : type iii secretion component protein scth
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1183128 - 1183694 bp
Length : 567 bp
Strand : -
Note : -

DNA sequence : 
ATGAATAGGATTGAAGGGCCGACCGATCACACTGTGCCGCAACCAACAGCACAGCCTTCGGTCAGTTCTGGGCATCAGCA
CAGCTTCGAGCAAGCACTGGAAATCTTGCCCGATCAACAAATGCTGAAAGAACGACAGCAACGTTGGCTACAGGGAGAAC
CTCTGGAAAACGTTTTAGGCGACTTAGATCCAACAACACAGCACAAAACTCTCTGGCAGTGGTATCAGACCTTATCGCCT
GAAAGCCAACCTTCGCAACGTGCCCAATTAGAAGCCAGGCTCACTACCCCTGTCCAAGAACACTTATGGTCGCAGTTTGG
TGGCTTAGCATTGCCCGTCAAGCCATCACTGGATATACCAGAATTGAGAGCAATTGTTCGTGAATTTGCGCCCACAGGCC
GACAACAGGAAACCGTACTTCTCAAAGTACTAGGCAACATTAAGCCTTTAGCGGGTAATGAATACCTGAGTGACCTAATT
CGACGTGAGTTGCAAACACTGATCCCTCGTAACGGTATGGTAGATAACCTACTACGAAACTCACACAAACTCGATTTGGA
GGAATAA

Protein sequence : 
MNRIEGPTDHTVPQPTAQPSVSSGHQHSFEQALEILPDQQMLKERQQRWLQGEPLENVLGDLDPTTQHKTLWQWYQTLSP
ESQPSQRAQLEARLTTPVQEHLWSQFGGLALPVKPSLDIPELRAIVREFAPTGRQQETVLLKVLGNIKPLAGNEYLSDLI
RRELQTLIPRNGMVDNLLRNSHKLDLEE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
lscH AAO18029.1 LscH Virulence TTSS locus Protein 3e-70 78

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
sctH YP_003039870.1 type iii secretion component protein scth VFG0407 Protein 2e-18 42