Gene Information

Name : sctI (PAU_01032)
Accession : YP_003039869.1
Strain : Photorhabdus asymbiotica ATCC 43949
Genome accession: NC_012962
Putative virulence/resistance : Virulence
Product : type iii secretion component protein scti
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1182790 - 1183128 bp
Length : 339 bp
Strand : -
Note : -

DNA sequence : 
ATGGACCTACCACAGATAAGAGAGATACTGATAACCAACTTGGATGAACTTAATAAACTCCAAGCCAGTGCCGAAAATAT
TGCACGTTTTGAACATGCTATGTCCAATCATGATCAGGGGCTCGGCAACAATCTGATCAATGAATTGGGTCAGATCAGAC
AACAGCTTACTCAGGCTAAACAAGAGTTGGAAACACAGCTAGCCGTCCCTGGCAGTGATCCCAACAGCCTGATGCAAATG
CAGTGGTCTCTGATGCGCATCACCTTGCAAGAAGAGTTGATTGCCAAAACGGTAGGACGACTCAATCAAAACGTTGAAAC
TTTAATGAAAGCCCAGTGA

Protein sequence : 
MDLPQIREILITNLDELNKLQASAENIARFEHAMSNHDQGLGNNLINELGQIRQQLTQAKQELETQLAVPGSDPNSLMQM
QWSLMRITLQEELIAKTVGRLNQNVETLMKAQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
lscI AAO18028.1 LscI Virulence TTSS locus Protein 2e-40 88

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
sctI YP_003039869.1 type iii secretion component protein scti VFG0217 Protein 7e-29 65
sctI YP_003039869.1 type iii secretion component protein scti VFG0408 Protein 7e-26 50