Gene Information

Name : sctK (PAU_01030)
Accession : YP_003039867.1
Strain : Photorhabdus asymbiotica ATCC 43949
Genome accession: NC_012962
Putative virulence/resistance : Virulence
Product : type iii secretion component protein sctk
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1181420 - 1182046 bp
Length : 627 bp
Strand : -
Note : -

DNA sequence : 
ATGGCAACAGGATTAACGCCCTACCAGTTCAAATTCTGCCCTGCCAGCTATATCCATTCTGACCATCTACCGCCAGAATG
GCTTTCAGTCCTGTCCTACCTTCCTGAGTGGCGTAGCTCTCCCAGGATCAATGGACTACTATTAACTCAATTTAATTTGA
ATGTGGGCTATGAATTGCCAACCGGGTTGGGAAATATCGCCCTATTAGAGCAATCCTATTTAGAGCAGATGCTTACCTGG
CTGGGTGCCCTATTGCATGGACAAGCTATTCGCCATTGCTTGTTGGCGACAGAACTTCGCCACTTGCATAACTCCCTCGG
TATAGAGGGGCATCGCTTCTGCTTAAAGTACCTCGATATCATCATCGGCAATTGGCCGACTGGTTGGCAACGTCCATTAC
CGCCAACGATTACTGCGAACTATTTTCGTACCAGTGCGCTACAATTTTGGCTAATGGCGATAGACCCCTTTCCTGTCGAT
TTCGCTAAACGTCTGAGCCTGCGATTTCCTCCCCATGAAAACCTCCCAGATTGGCCTGTCAGCCAGACAGAACGACCGTT
AGCACAAGCATTGTGTCTCAAATTAGCTAAGCAAGTGAATACAGAATGTTACCTTTTATTAAAATAA

Protein sequence : 
MATGLTPYQFKFCPASYIHSDHLPPEWLSVLSYLPEWRSSPRINGLLLTQFNLNVGYELPTGLGNIALLEQSYLEQMLTW
LGALLHGQAIRHCLLATELRHLHNSLGIEGHRFCLKYLDIIIGNWPTGWQRPLPPTITANYFRTSALQFWLMAIDPFPVD
FAKRLSLRFPPHENLPDWPVSQTERPLAQALCLKLAKQVNTECYLLLK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
lscK AAO18026.1 LscK Virulence TTSS locus Protein 6e-77 86

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
sctK YP_003039867.1 type iii secretion component protein sctk VFG0410 Protein 1e-34 47
sctK YP_003039867.1 type iii secretion component protein sctk VFG0219 Protein 3e-38 46