Gene Information

Name : sctL (PAU_01029)
Accession : YP_003039866.1
Strain : Photorhabdus asymbiotica ATCC 43949
Genome accession: NC_012962
Putative virulence/resistance : Virulence
Product : type iii secretion component protein sctl
Function : -
COG functional category : N : Cell motility
COG ID : COG1317
EC number : -
Position : 1180824 - 1181441 bp
Length : 618 bp
Strand : -
Note : -

DNA sequence : 
ATGTTACCTTTTATTAAAATAACAAAAGAACACCCCCAACTGTCTCCTGAACTTCTGATACTACGTAAAGCAGACTATCA
GACCTGTCTCAATGCCGAATCGTTGCTTGATGCCGCTCGGGCCCAAGCGAAGGAAATTGAACGAGAGGCTCAAACAGTTT
ATGAGCAACAAAAAGAGCTGGGTTGGCAGGCAGGTATTGATGCCGCTCGCGCAGAACAAGCCAGCCTGATTCATCAAACC
CAGTTGCAATGCCAGCAATACTACCGGCAAGTCGAGCAACAAATGAGCAATGTGGTATTACAGGCTGTACGAAAGATCCT
GAAAAATTACGATCAGATTTCCCTTACCTTACAAGTGGTTCGAGAAGCGCTTTCATTAGTCAGCAACCAAAAGCAGGTCA
TCCTACGGGTTAATCCTGAACAAGCTGCAACAGTGCGCGAACAGATATCTCGAGTACATAAAGATTTTCCTGAAATCGGC
TATTTAGAAGTCACCGCTGATGCTCGCCTCGATCAAGGCGGTTGTATTCTGGAAACAGAAGTGGGGATCATTGATGCCAG
CTTAGATAGCCAACTCGACGCACTCATGTCCGCTATTAATAGCAAATGGAAAAGTTAA

Protein sequence : 
MLPFIKITKEHPQLSPELLILRKADYQTCLNAESLLDAARAQAKEIEREAQTVYEQQKELGWQAGIDAARAEQASLIHQT
QLQCQQYYRQVEQQMSNVVLQAVRKILKNYDQISLTLQVVREALSLVSNQKQVILRVNPEQAATVREQISRVHKDFPEIG
YLEVTADARLDQGGCILETEVGIIDASLDSQLDALMSAINSKWKS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAO18079.1 LscL Not tested TTSS locus Protein 7e-74 90

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
sctL YP_003039866.1 type iii secretion component protein sctl VFG0411 Protein 6e-56 68
sctL YP_003039866.1 type iii secretion component protein sctl VFG0220 Protein 3e-53 63