Gene Information

Name : ECBD_1532 (ECBD_1532)
Accession : YP_003035777.1
Strain : Escherichia coli Escherichia coli BL21-Gold(DE3)pLysS AG
Genome accession: NC_012947
Putative virulence/resistance : Virulence
Product : MerR family transcriptional regulator
Function : -
COG functional category : K : Transcription
COG ID : COG0789
EC number : -
Position : 1629348 - 1630079 bp
Length : 732 bp
Strand : -
Note : PFAM: regulatory protein MerR; SMART: regulatory protein MerR; KEGG: elf:LF82_1354 HTH-type transcriptional regulator MlrA

DNA sequence : 
ATGGCGCTTTACACAATTGGTGAAGTGGCGTTGCTTTGTGATATTAACCCTGTCACGTTACGCGCGTGGCAGAGGCGTTA
CGGATTGCTGAAACCGCAACGGACAGACGGCGGTCATCGGCTGTTCAACGATGCCGATATTGACCGGATCCGCGAGATCA
AACGCTGGATCGACAACGGCGTGCAGGTCAGCAAAGTTAAAATGCTGCTCAGTAATGAAAATGTTGATGTGCAGAACGGC
TGGCGCGATCAGCAAGAAACATTACTGACTTACTTGCAAAGCGGCAATCTGCATAGCCTGCGAACGTGGATCAAAGAGCG
CGGTCAGGATTACCCCGCCCAGACGCTCACCACGCATCTGTTTATTCCTCTGCGCCGACGGCTTCAGTGCCAACAACCGA
CTCTCCAGGCGCTGCTGGCGATCCTCGACGGCGTACTGATCAACTACATCGCCATTTGTCTGGCTTCGGCACGTAAAAAA
CAGGGTAAAGATGCGCTGGTGGTTGGCTGGAATATTCAGGATACCACCCGTCTGTGGCTGGAGGGCTGGATTGCCAGTCA
ACAAGGATGGCGCATTGATGTCCTCGCCCACTCGCTCAATCAACTACGCCCTGAACTGTTCGGAGGCCGTACATTGCTGG
TGTGGTGCGGTGAAAATCGAACCTCCGCCCAACAGCAGCAACTCACCAGTTGGCAGGAACAAGGCCATGATATTTTCCCA
CTCGGCATTTAA

Protein sequence : 
MALYTIGEVALLCDINPVTLRAWQRRYGLLKPQRTDGGHRLFNDADIDRIREIKRWIDNGVQVSKVKMLLSNENVDVQNG
WRDQQETLLTYLQSGNLHSLRTWIKERGQDYPAQTLTTHLFIPLRRRLQCQQPTLQALLAILDGVLINYIAICLASARKK
QGKDALVVGWNIQDTTRLWLEGWIASQQGWRIDVLAHSLNQLRPELFGGRTLLVWCGENRTSAQQQQLTSWQEQGHDIFP
LGI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY1730 NP_456138.1 putative transcriptional regulator Not tested SPI-2 Protein 6e-47 44
t1258 NP_805061.1 transcriptional regulator Not tested SPI-2 Protein 6e-47 44
ORF 242 CAB37409.1 - Not tested SPI-2 Protein 9e-47 44
SC1411 YP_216398.1 MerR family transcriptional regulator Not tested SPI-2 Protein 2e-46 44
orf242 NP_460355.1 regulatory protein Not tested SPI-2 Protein 1e-46 44

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ECBD_1532 YP_003035777.1 MerR family transcriptional regulator VFG0491 Protein 5e-47 44