Name : lysS (TBMG_03637) Accession : YP_003033640.1 Strain : Mycobacterium tuberculosis KZN 1435 Genome accession: NC_012943 Putative virulence/resistance : Unknown Product : lysyl-tRNA synthetase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG1190 EC number : - Position : 4026893 - 4028410 bp Length : 1518 bp Strand : - Note : class II; LysRS2; catalyzes a two-step reaction, first charging a lysine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; in Methanosarcina barkeri, LysRS2 charges both tRNA DNA sequence : GTGAGTGCCGCTGACACAGCAGAAGACCTTCCTGAGCAGTTCCGGATTCGCCGGGACAAGCGCGCTCGCTTGCTGGCCCA GGGGCGCGATCCCTATCCCGTCGCGGTGCCGCGCACTCACACGTTGGCCGAGGTTCGCGCCGCCCACCCTGACTTGCCGA TCGATACCGCGACCGAAGACATCGTCGGCGTCGCGGGCCGAGTGATCTTTGCGCGCAACTCGGGAAAGCTATGCTTTGCG ACACTTCAGGACGGCGATGGTACCCAGCTGCAAGTGATGATCAGCCTCGACAAGGTCGGCCAGGCTGCTCTCGACGCATG GAAAGCCGATGTCGACCTGGGCGACATCGTCTACGTGCATGGCGCGGTGATCAGTTCGCGCCGCGGCGAGCTGTCCGTCC TGGCGGATTGCTGGCGGATCGCCGCCAAGTCGCTGCGGCCGCTTCCCGTCGCGCACAAAGAGATGAGTGAAGAGTCGCGG GTTCGTCAGCGCTATGTTGACCTCATAGTTCGACCGGAAGCGCGCGCGGTGGCTCGACTACGGATCGCCGTCGTCCGCGC GATCCGGACGGCGCTTCAACGTCGTGGGTTCCTGGAAGTCGAGACGCCCGTCTTGCAGACGTTAGCCGGTGGTGCGGCGG CCCGTCCGTTCGCCACTCATTCCAATGCCCTAGACATCGATCTGTACCTGCGGATCGCGCCGGAACTGTTCCTCAAGCGC TGCATCGTGGGTGGTTTCGACAAGGTCTTCGAACTTAATCGAGTGTTCCGAAACGAAGGAGCCGATTCCACGCATTCTCC GGAATTCTCCATGCTGGAGACCTACCAGACCTACGGAACCTATGACGATTCGGCAGTCGTCACCCGGGAGCTTATTCAAG AGGTGGCCGATGAGGCGATCGGAACCAGACAACTGCCGTTGCCCGACGGCAGTGTCTATGACATCGACGGAGAATGGGCG ACTATACAAATGTACCCGTCGCTGTCTGTGGCGCTCGGTGAAGAGATCACACCGCAGACGACGGTCGATCGCTTACGTGG GATCGCCGATAGCCTTGGCCTGGAGAAAGACCCAGCGATTCATGACAACCGTGGCTTCGGCCACGGCAAACTCATCGAGG AACTCTGGGAGCGCACAGTGGGCAAGAGCTTGAGCGCACCCACATTTGTCAAGGATTTTCCGGTTCAGACAACGCCTTTG ACCCGTCAGCACCGCAGTATCCCCGGCGTAACCGAGAAGTGGGACCTCTATCTGCGCGGAATCGAACTTGCCACCGGCTA CTCGGAATTAAGCGACCCGGTAGTCCAGCGGGAGAGATTCGCCGACCAGGCCCGTGCCGCGGCCGCTGGCGATGACGAAG CGATGGTGCTTGACGAGGATTTTCTGGCCGCTCTGGAGTACGGCATGCCACCGTGCACCGGAACCGGAATGGGTATCGAT CGGTTGTTGATGTCTTTGACTGGGTTGTCAATTAGGGAGACAGTTTTGTTCCCGATTGTTCGACCACACTCCAACTGA Protein sequence : MSAADTAEDLPEQFRIRRDKRARLLAQGRDPYPVAVPRTHTLAEVRAAHPDLPIDTATEDIVGVAGRVIFARNSGKLCFA TLQDGDGTQLQVMISLDKVGQAALDAWKADVDLGDIVYVHGAVISSRRGELSVLADCWRIAAKSLRPLPVAHKEMSEESR VRQRYVDLIVRPEARAVARLRIAVVRAIRTALQRRGFLEVETPVLQTLAGGAAARPFATHSNALDIDLYLRIAPELFLKR CIVGGFDKVFELNRVFRNEGADSTHSPEFSMLETYQTYGTYDDSAVVTRELIQEVADEAIGTRQLPLPDGSVYDIDGEWA TIQMYPSLSVALGEEITPQTTVDRLRGIADSLGLEKDPAIHDNRGFGHGKLIEELWERTVGKSLSAPTFVKDFPVQTTPL TRQHRSIPGVTEKWDLYLRGIELATGYSELSDPVVQRERFADQARAAAAGDDEAMVLDEDFLAALEYGMPPCTGTGMGID RLLMSLTGLSIRETVLFPIVRPHSN |
Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
lysS | YP_005163386.1 | lysyl-tRNA synthetase | Not tested | Not named | Protein | 6e-142 | 61 |