Gene Information

Name : TBMG_03003 (TBMG_03003)
Accession : YP_003032987.1
Strain : Mycobacterium tuberculosis KZN 1435
Genome accession: NC_012943
Putative virulence/resistance : Resistance
Product : adhesion component transport ATP-binding protein ABC transporter
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 3309418 - 3310164 bp
Length : 747 bp
Strand : -
Note : -

DNA sequence : 
ATGAACCGGCAACCTATCGTTCAGCTGAGTAACTTGAGCTGGACATTCCGAGAAGGCGAAACCCGACGACAAGTCCTAGA
CCACATCACCTTCGATTTCGAGCCCGGTGAGTTTGTCGCGCTGCTGGGGCAAAGTGGAAGTGGTAAAAGCACTTTGCTGA
ACCTCATCAGTGGCATAGAAAAGCCCACCACAGGTGACGTCACAATTAATGGGTTCGCTATCACTCAGAAAACCGAGCGA
GACCGGACGTTGTTCCGGCGCGATCAGATTGGCATCGTCTTTCAATTTTTCAACCTGATTCCCACTCTTACCGTGTTGGA
AAATATTACGCTGCCTCAGGAACTGGCCGGAGTTTCTCAGAGGAAAGCGGCCGTGGTCGCTCGTGACCTTCTCGAAAAAG
TGGGCATGGCCGACCGTGAACGCACCTTTCCCGATAAACTCTCCGGCGGAGAACAACAACGGGTCGCTATTTCCAGAGCG
TTGGCGCATAATCCCATGCTGGTGTTAGCCGATGAGCCGACCGGCAACCTGGACTCCGATACCGGGGATAAAGTCTTGGA
TGTTCTGCTTGATCTCACCCGCCAAGCAGGTAAAACCTTAATCATGGCTACGCATAGCCCGTCGATGACGCAGCATGCCG
ACCGGGTAGTCAACTTACAGGGCGGCAGGTTGATACCTGCCGTGAACCGAGAAAATCAAACCGACCAGCCGGCCAGCACG
ATCCTATTGCCCACGTCATATGAATGA

Protein sequence : 
MNRQPIVQLSNLSWTFREGETRRQVLDHITFDFEPGEFVALLGQSGSGKSTLLNLISGIEKPTTGDVTINGFAITQKTER
DRTLFRRDQIGIVFQFFNLIPTLTVLENITLPQELAGVSQRKAAVVARDLLEKVGMADRERTFPDKLSGGEQQRVAISRA
LAHNPMLVLADEPTGNLDSDTGDKVLDVLLDLTRQAGKTLIMATHSPSMTQHADRVVNLQGGRLIPAVNRENQTDQPAST
ILLPTSYE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 8e-37 43
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 8e-37 43
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 8e-37 43
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-35 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
TBMG_03003 YP_003032987.1 adhesion component transport ATP-binding protein ABC transporter CP001581.1.gene798.p Protein 5e-38 45
TBMG_03003 YP_003032987.1 adhesion component transport ATP-binding protein ABC transporter NC_012469.1.7686878. Protein 4e-42 43
TBMG_03003 YP_003032987.1 adhesion component transport ATP-binding protein ABC transporter NC_008702.1.4606598. Protein 7e-34 43
TBMG_03003 YP_003032987.1 adhesion component transport ATP-binding protein ABC transporter NC_012469.1.7685735. Protein 9e-42 41