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Name : SSUBM407_0560 (SSUBM407_0560) Accession : YP_003028322.1 Strain : Streptococcus suis BM407 Genome accession: NC_012926 Putative virulence/resistance : Unknown Product : sugar PTS system transporter subunit IIBC Function : - COG functional category : G : Carbohydrate transport and metabolism COG ID : COG1263 EC number : - Position : 620231 - 621739 bp Length : 1509 bp Strand : + Note : Orthologue of S. suis P17 (AM946016) SSU1229 DNA sequence : ATGAATTTTAAGAAGTTTTCTCAGCTAGGTCAGGCCTTTATGCTGCCAATCTCAATTTTGCCTGTTGCTGGTCTCTTACT GGGAATTGGAGGCGCTTTATCAAATAGTAATGCTGTAGCACAATTTCCTGTATTGGATCAAGCGTGGTTGCAAGCTGTAT TCACTATCATGAGTACGGCAGGTAGTGCGGTATTTGCGAATTTAGCATTGATTTTTGCAATTGGTGTTGCTGTAGGTTTG GCAGATGCTGATAAGGGGACTGCTGGCCTATCTGCTGGGGTTGCATACTTGGTTTATACGGCTACTATTAGTGGATTTTT AACTCTTTTTGCTGATAAGGGAGCAAGCATTGATACTGGAGTTTTGGGCGCTTTAGCGATTGGTATCACTGTTGCAACTT TACACAATAAATATCGAAAAATTGAATTACCAGCCTTTCTTGGTTTCTTCGGGGGCTCTCGTTTTATTCCAATTATTTCA TCATTTGCAGCAATTGCGATTGGCTCCATTTTTTATATAATTTGGCCACCGATTCAGAATTTATTAGTTGATTTTGGTAA GGCAATAGCAGAGATGGGAAGTTTTGGAACCTTCTTATATGGTTTTGGATTGCGTTTGACAGGTGCATTTGGCTTGCACC ATACCATCTATCCAATGTTTTGGTATACTTCATTAGGTGGAAGTGAAGTGGTAGCAGGTGAGACGATCCAAGGTGCGCAA AATATTTTCTTTGCTCAATTAGCAGATGCGAATCACACAGGCTTATTTACTTATGGAACTCGATTTTTTGCTGGTCGATT TGCAACGATGATTTTTGGTCTACCAGCATCTTGTTTGGCTATGTATCACGCAATTCCTAAGGAAAATCGTAAGAAGGTAG GCAGTTTTTATTCAAGTAGTGCATTAACTTCCCTATTGACAGGAATTACTGAACCAATCGAATTTTCTTTCTTGTTTGTT GCTCCATGGCTATATGTTGTTCACGCATTTTTAGATGGACTATCATTCTTAGTCGCAGATCTCCTGCAAATTCGTATTGG GAACTCATTTTCTGGTGGGCTTATTGATTACTTGATTTTTGGTGTTTTCCAAGGAAATGACAAAACCAATTGGATTTACG TGATTCCTGTTGGCTTGCTTTGGGCAGCAGTTTATTATCTAGTTTTCAAATTTTTAGTAACCAAATTTCACGTGCTAGTT CCTGGTATGGAAAGCAGTGACCAAGCATCACATTCGGAAAAAGTTTTATCAAACGGTTCTAGTCTTCGTGATAATGCAAT TGCTATCATCGATGCTCTTGGTGGAGCAGATAATATTGAGAATGTGACTGCCTGTGCGACTCGATTAAGAGTATCGCTCA GAAATAGTGGTCTTGTGGATAAGGGAGTTATTCAGTCTATAGGTGCAACGGCTGTTTTGGATGTAAAAGGAGGAATACAG GCTATTTTCGGAGGTAAGGCTATTCTGTATAGCCAAGAAATCAATCAAATTCTTGGTCTTGAAGAATAG Protein sequence : MNFKKFSQLGQAFMLPISILPVAGLLLGIGGALSNSNAVAQFPVLDQAWLQAVFTIMSTAGSAVFANLALIFAIGVAVGL ADADKGTAGLSAGVAYLVYTATISGFLTLFADKGASIDTGVLGALAIGITVATLHNKYRKIELPAFLGFFGGSRFIPIIS SFAAIAIGSIFYIIWPPIQNLLVDFGKAIAEMGSFGTFLYGFGLRLTGAFGLHHTIYPMFWYTSLGGSEVVAGETIQGAQ NIFFAQLADANHTGLFTYGTRFFAGRFATMIFGLPASCLAMYHAIPKENRKKVGSFYSSSALTSLLTGITEPIEFSFLFV APWLYVVHAFLDGLSFLVADLLQIRIGNSFSGGLIDYLIFGVFQGNDKTNWIYVIPVGLLWAAVYYLVFKFLVTKFHVLV PGMESSDQASHSEKVLSNGSSLRDNAIAIIDALGGADNIENVTACATRLRVSLRNSGLVDKGVIQSIGATAVLDVKGGIQ AIFGGKAILYSQEINQILGLEE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| ef0067 | AAM75272.1 | EF0067 | Not tested | Not named | Protein | 2e-148 | 70 |
