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Name : SSUBM407_0279 (SSUBM407_0279) Accession : YP_003028051.1 Strain : Streptococcus suis BM407 Genome accession: NC_012926 Putative virulence/resistance : Resistance Product : cation-transporting ATPase Function : - COG functional category : P : Inorganic ion transport and metabolism COG ID : COG2217 EC number : - Position : 302241 - 304109 bp Length : 1869 bp Strand : - Note : Orthologue of S. suis P17 (AM946016) SSU0288 DNA sequence : ATGACACTCGTAACCAACCTCAAACAACACAGCCACATCATCACGACCGCTCTTTGCTTGGCGCTCATTCTAATAGGTAT CCTTCTGTTTCAGACTGGACAGGGATGGGCTCCTATCCTCTTCATTTCAGCCTTTGTCATCGGGGGCTACCAATCAGCCA AGGAAGGCATTTCTGAGCTGATTTTCGACAAGCACCTGTCTGTCGACCTGCTCATGATTTTAGCTGCTATCGGCTCTGGT CTAATTGGCTACTGGATGGAGGGGGCTCTACTCATCTTCATCTTCTCCCTTTCTTCTACTCTGGAAGAATTAGCCATGGA AAAAAGCAAGAATGCGATCGCTGCTTTGATGAACATGACCCCTCCAACAGCTCGCAAAATCGAGGAAAATGGTGACATTA CTGTCTTAGACACCGCAGCCATCCGCATTGGCGACCTCCTGCAAGTCCGCAAGGGTGACACGGTTCCACTGGATGCTACC CTCATCAGTCCGCAATCCATCTTTGACGAATCCATGATTACAGGCGAGCCGCTCCCTGCGGAGAAAATGGCTGGCGATGC TGTTATCGGCGGAACCATTAACCAAGGTCCAACTGTGACCGTACAAGTTACGGCTGAAAAAGGCGATGCCCTCTTCGATA AAATCGTCCAGATGGTTGAAAACGCCCAAGAATCCAAATCAAAAACAGCGACTTTCATTGAAAATATGGAAGATACCTAT GTCAAGGTTGTCTTGGTGGTGGTACCACTCTTCATCCTCCTTGCTCATTTTGCACTGGGCTGGGACTGGTTAACTGCCTT CTACCGAGGCATGATTCTCTTAACCATCGCTTCTCCTTGTGCCCTCGTAGCTTCTTCTTCACCCGCAACACTTTCTGCCA TCAGCCGTGCGGCACGTAAGGGCATGATTATCAAGGGCGGTGACATTGCGGACAACATCGCCAATCTAGAGGCCATCGTC TTTGATAAGACGGGTACCCTGACCATTGGTAAACCTGAAGTTGTAGGTGCGACCTATCTTGGCGATGAAGAGCTTATCAA GCAGGTTGTTCAGGCAGTTGAAAAACAATCAAGCCACCCAATCGCTCAGGCTCTCATGACCTATACGGCTGACAGCTCTG CTATTGCCCTTCAAAGCCTAGAAGACGTGACAGGAAAAGGCTTGGTGGCAGGCTATGAGGGCGACAGCTGGAAAATCGGT AAGGCGGGATTTGTGGCGGACAGCCTGGTGAGTCCCCTGTCTGCTGGCTTGCTGGCACAGATCGATGAGGCGGAAAGCAC TGGGAAAACCCTGGTCTATGTCAGCCAAAATGATGTGCTGGTGGCGATCTTCATGGTGGAAGATAGTTTGAAACCTGAGA GCAAGCAGCTGATTGCCCAGTTGAAAGAAATGGGCGTGACGCCAATTCTCTTGACGGGTGACCAAGAAAAGACGGCTCGT TACGTGGCGAGTCAGGTCGGTATTGACCGTGTGATTGCCAACTGTCTGCCGACGGATAAGGCTGCTGTTATCCAAGAATT ACAAACCGAGTTTGCGTCTGTCGGCATGGTCGGAGACGGCATCAACGACGCTCCCGCCCTGGCTCAAGCCAATGTCAGCT ATGCTATGGGAAGCGGAACGGACATCGCTATGGAGTCAGCTGACATCGTACTCATGGAAGACCTGACGAGAATTCCTTAC TCCATTCGTCTCTCTAAGAAAATGCGGGGCATCATCAAGCAGAACATCATCTTTGCGCTATCTGTCATTGCCCTTCTTAT CATCTCCAACCTCTTCCAGTCTATCAACCTCCCACTCGGTGTGGTGGGCCACGAAGGATCAACGATTTTGGTGATTTTGA ATGGGTTGAGACTATTGTATTTTAAATAG Protein sequence : MTLVTNLKQHSHIITTALCLALILIGILLFQTGQGWAPILFISAFVIGGYQSAKEGISELIFDKHLSVDLLMILAAIGSG LIGYWMEGALLIFIFSLSSTLEELAMEKSKNAIAALMNMTPPTARKIEENGDITVLDTAAIRIGDLLQVRKGDTVPLDAT LISPQSIFDESMITGEPLPAEKMAGDAVIGGTINQGPTVTVQVTAEKGDALFDKIVQMVENAQESKSKTATFIENMEDTY VKVVLVVVPLFILLAHFALGWDWLTAFYRGMILLTIASPCALVASSSPATLSAISRAARKGMIIKGGDIADNIANLEAIV FDKTGTLTIGKPEVVGATYLGDEELIKQVVQAVEKQSSHPIAQALMTYTADSSAIALQSLEDVTGKGLVAGYEGDSWKIG KAGFVADSLVSPLSAGLLAQIDEAESTGKTLVYVSQNDVLVAIFMVEDSLKPESKQLIAQLKEMGVTPILLTGDQEKTAR YVASQVGIDRVIANCLPTDKAAVIQELQTEFASVGMVGDGINDAPALAQANVSYAMGSGTDIAMESADIVLMEDLTRIPY SIRLSKKMRGIIKQNIIFALSVIALLIISNLFQSINLPLGVVGHEGSTILVILNGLRLLYFK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| cadA | YP_005732869.1 | cadmium-translocating P-type ATPase | Not tested | Type-V SCCmec | Protein | 1e-90 | 42 |
| SE0062 | NP_763617.1 | copper-transporting ATPase copA | Not tested | SCCpbp4 | Protein | 1e-90 | 42 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| SSUBM407_0279 | YP_003028051.1 | cation-transporting ATPase | BAC0092 | Protein | 1e-99 | 42 |
