|
Name : SSUBM407_0197 (SSUBM407_0197) Accession : YP_003027975.1 Strain : Streptococcus suis BM407 Genome accession: NC_012926 Putative virulence/resistance : Resistance Product : ABC transporter ATP-binding protein Function : - COG functional category : P : Inorganic ion transport and metabolism COG ID : COG1116 EC number : - Position : 208207 - 208989 bp Length : 783 bp Strand : + Note : Orthologue of S. suis P17 (AM946016) SSU0204 DNA sequence : ATGGCAACAGAAGTAAAAAAAATTAAGGTCAAAATTGAAGATGTTTCAAAATCATTTCAGACAAATCATGGTGAGGTTGT TGCACTAAATCAAATAAATTTAGAAATCTTTGAGAATGAAATAGTTACAGTTGTTGGTCCATCTGGTTGTGGTAAATCTA CTCTACTAAACTTGGTTGCAGGTTTGGAACCTGTAACTTCCGGAAAAATTTATTGTGATGATAATGAAATTGTTGGCATT GGAGTTGAGCGTGGAGTTGTTTTTCAACAATATGCATTATTTCCTTGGATGAGTGTACTACAGAATGTAATGTTCGGACC TGAAATGCAAGGAAAATCAAAGTTAGAAGCTAGTGAAATAGCTAACAAGTATATTAAAATGGTTGGATTACAAGAATTTT CCAATCATTATCCGAAAGAATTATCGGGTGGAATGAAGCAAAGGGTTGCTATAGCGAGAGCTTATGCTGTTAACCCGTCA ATTCTATTAATGGATGAGCCCTTTGGAGCATTAGATGCACTAACTAGAATTCAGCTTCAAGAGGAGTTGATTGAAATGTT AGGACAAGAACAAAAAACTTGTTTTTTCATAACACATGATATTGAAGAGGCGGTACTATTAGGAAATCGAGTGATTGTTA TGAGTCCACGCCCTGGAGAAATTAAAGAAATTGTGAACGTTGATTTACCATTTCCAAGAAATCAGTTGACAAAGTTTGAA AAAAATTTTATGGACATAAAGAACCATATATGGTCACTTGTTTATAAAGATTTTCTAATATAA Protein sequence : MATEVKKIKVKIEDVSKSFQTNHGEVVALNQINLEIFENEIVTVVGPSGCGKSTLLNLVAGLEPVTSGKIYCDDNEIVGI GVERGVVFQQYALFPWMSVLQNVMFGPEMQGKSKLEASEIANKYIKMVGLQEFSNHYPKELSGGMKQRVAIARAYAVNPS ILLMDEPFGALDALTRIQLQEELIEMLGQEQKTCFFITHDIEEAVLLGNRVIVMSPRPGEIKEIVNVDLPFPRNQLTKFE KNFMDIKNHIWSLVYKDFLI |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | ABA47263.1 | ABC transporter | Not tested | S-PAI | Protein | 1e-42 | 44 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| SSUBM407_0197 | YP_003027975.1 | ABC transporter ATP-binding protein | NC_012469.1.7686878. | Protein | 1e-22 | 41 |
