Gene Information

Name : SSUBM407_1484 (SSUBM407_1484)
Accession : YP_003029187.1
Strain : Streptococcus suis BM407
Genome accession: NC_012926
Putative virulence/resistance : Resistance
Product : ABC transporter ATP-binding protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 1566375 - 1567133 bp
Length : 759 bp
Strand : -
Note : Orthologue of S. suis P17 (AM946016) SSU1407

DNA sequence : 
ATGTCAGTTTTAGATGTTCAACACGTTCAAAAGATATACAGTTCTCTCTTTAAGGCGGGACAGGTTGAAGCTTTGAAGGA
TATTCATTTTGCAGTGGAAAAGGGTGAATATGTCGCTATTATGGGTGAGTCAGGTTCTGGTAAGTCCACCTTGCTCAATA
TTTTGGCAACCCTTGATAAGCCAACGCAGGGCAAGGTCTTGCTTAACGGATTGGATACCCAATCTATCAAGAGCAAGGAA
GCGGCAGCCTTTCGTCGGGAGAAATTGGGCTTTGTCTTCCAAGATTTCAATCTCTTGGATACTCTTTCTGTCAAGGATAA
TGTGCTCTTGCCTCTGGTTTTGTCTCGCTATCCGATTGATGAGATGAACAAGCGACTCGTTCATACGCTCAATAGCCTGG
GAATTGCGACCTTGCAAGACAAGATGCCCTACGAGATTTCGGGTGGTCAGCAGCAGCGAGTTGCGGTGGCGCGTGCCATC
ATCACCCAGCCAGAAATTCTCTTAGCGGATGAGCCGACTGGGGCCCTCGACTCTAAATCAACGGCAACTCTTCTAGATAT
TTTTGAAAAAATCAACCAAGAGGGGCAAACGATTCTGATGGTAACCCACTCGACAGTAGCAGCTAGTCGTGCCAAACGGG
TTCTCTTCATCAAGGATGGCATCCTCTACAATCAAATCTACCGAGGTGAGAGAACTAGTCAGGAAATGTATCAGTTGATT
TCAGATACCTTGACACTTATGGCGAATCGAGGTGAGTAG

Protein sequence : 
MSVLDVQHVQKIYSSLFKAGQVEALKDIHFAVEKGEYVAIMGESGSGKSTLLNILATLDKPTQGKVLLNGLDTQSIKSKE
AAAFRREKLGFVFQDFNLLDTLSVKDNVLLPLVLSRYPIDEMNKRLVHTLNSLGIATLQDKMPYEISGGQQQRVAVARAI
ITQPEILLADEPTGALDSKSTATLLDIFEKINQEGQTILMVTHSTVAASRAKRVLFIKDGILYNQIYRGERTSQEMYQLI
SDTLTLMANRGE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-33 43
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 5e-35 41
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 5e-35 41
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 5e-35 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SSUBM407_1484 YP_003029187.1 ABC transporter ATP-binding protein CP001581.1.gene798.p Protein 1e-41 46
SSUBM407_1484 YP_003029187.1 ABC transporter ATP-binding protein NC_008702.1.4606598. Protein 7e-41 43
SSUBM407_1484 YP_003029187.1 ABC transporter ATP-binding protein NC_012469.1.7686878. Protein 9e-37 43
SSUBM407_1484 YP_003029187.1 ABC transporter ATP-binding protein CP001581.1.gene598.p Protein 3e-36 41