Gene Information

Name : SSUBM407_1482 (SSUBM407_1482)
Accession : YP_003029185.1
Strain : Streptococcus suis BM407
Genome accession: NC_012926
Putative virulence/resistance : Unknown
Product : transposase
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG1943
EC number : -
Position : 1563725 - 1564189 bp
Length : 465 bp
Strand : -
Note : Orthologue of S. suis P17 (AM946016) SSU0941

DNA sequence :
ATGGCGCAAAAGGCACATAGTTTATCACATACAAAGTGGCTGTGTAAATACCACATTGTCTTCACACCTAAGTATAGACG
AAAAATCATCTATAATCAATATCGAAGTAGTTTGGGAGAAATATTCCGACGTTTGTGTACTTATAAAGGCGTAGAAATTA
TCGAAGGACATCTGATGCCGGATCATGTTCATATGTTAGTCAGTATTCCTCCGCGATTAAGTGTATCAAGCTTTATAGGA
TATTTAAAAGGTAAGAGTGCTCTAATGATGTTTGATAAACACGCCAATCTCAAATACAAATTTGGTAATCGTCATTTCTG
GGCAGAGGGATATTATGTAAGTACGGTTGGACTAAATGAAGCCACAATTAAGAAATATATACAAGAACAGGAAAAACATG
ATATAGCACTTGATAAGTTGAGTGTAAAAGAGTATGAAGATCCCTTTAGGGATAATGGCAAGTAG

Protein sequence :
MAQKAHSLSHTKWLCKYHIVFTPKYRRKIIYNQYRSSLGEIFRRLCTYKGVEIIEGHLMPDHVHMLVSIPPRLSVSSFIG
YLKGKSALMMFDKHANLKYKFGNRHFWAEGYYVSTVGLNEATIKKYIQEQEKHDIALDKLSVKEYEDPFRDNGK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
EF0615 NP_814372.1 IS200 family transposase Not tested Not named Protein 6e-41 64
ef0123 AAM75324.1 EF0123 Not tested Not named Protein 4e-41 64
SP_1064 NP_345538.1 IS200 family transposase Not tested PPI-1 Protein 2e-43 62
CPR_0382 YP_697711.1 IS1469, transposase Not tested Not named Protein 7e-41 59
tnpA NP_455584.1 transposase for insertion sequence element is200 Not tested SPI-5 Protein 4e-36 53