Gene Information

Name : SSUBM407_1016 (SSUBM407_1016)
Accession : YP_003028758.1
Strain : Streptococcus suis BM407
Genome accession: NC_012926
Putative virulence/resistance : Resistance
Product : ABC transporter ATP-binding protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 1096674 - 1097426 bp
Length : 753 bp
Strand : +
Note : Orthologue of S. suis P17 (AM946016) SSU0832

DNA sequence : 
ATGTTATTAGAAATCAATCATTTAGAAAAAGTTTACCGCACGCGCTTTTCAAAAGAGGAAACTCGTGCCTTGCAAGATGT
GGATTTTAAGGTAGAAGAGGGCGAGTTTATCGCTATCATGGGGGAAAGTGGTTCTGGTAAGACGACTTTGCTCAACATTC
TAGCAACCCTGGACAAGCCGACGAGGGGCTCTGTTATCTTAAACAATCAAGACATCACCAAAATCAAGGAAAGCAAGCTG
GCAGATTTCCGTTTGCGTAATCTTGGCTTTGTCTTCCAAGATTTTAACCTCTTGGACACCCTGTCCATCCAAGACAATAT
CTTTTTACCTCTGGTATTGGCACGTGAGAGCTATCAGGAAATGGAGAAACGGTTGGAAGTATTGGCACCAAAACTACGGA
TTCAAGATTTGCTGAAAAAACGTCCCTTTGAACTTTCTGGTGGACAAAAGCAGCGCGTGGCTATTGCTCGTAGTTTGATT
ACCCAGCCACAGATTGTCCTAGCGGACGAACCGACGGCTGCCCTAGATTATCGCAATTCGGAAGACTTGCTGAATTTGTT
TGAAGAGATTAACCGTGACGGGCAAACTATTCTCATGGTGACCCACTCGGCCAACGCAGCCAGCCACGCCAAACGTGTCT
TGTTTATCAAAGATGGTCGTATTTTCCATCAACTGTACAAGGCAGACAAGAGCAATCAAGACTTTGCCAAGGAGATTTCA
CTCAATATGTCTGCACTTTTAGGGGGTGAGTAG

Protein sequence : 
MLLEINHLEKVYRTRFSKEETRALQDVDFKVEEGEFIAIMGESGSGKTTLLNILATLDKPTRGSVILNNQDITKIKESKL
ADFRLRNLGFVFQDFNLLDTLSIQDNIFLPLVLARESYQEMEKRLEVLAPKLRIQDLLKKRPFELSGGQKQRVAIARSLI
TQPQIVLADEPTAALDYRNSEDLLNLFEEINRDGQTILMVTHSANAASHAKRVLFIKDGRIFHQLYKADKSNQDFAKEIS
LNMSALLGGE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-29 43
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 1e-29 43
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-29 43
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-28 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SSUBM407_1016 YP_003028758.1 ABC transporter ATP-binding protein CP001581.1.gene798.p Protein 2e-41 47
SSUBM407_1016 YP_003028758.1 ABC transporter ATP-binding protein NC_012469.1.7686878. Protein 2e-38 45
SSUBM407_1016 YP_003028758.1 ABC transporter ATP-binding protein CP001581.1.gene598.p Protein 8e-39 42