Gene Information

Name : SSUBM407_0946 (SSUBM407_0946)
Accession : YP_003028691.1
Strain : Streptococcus suis BM407
Genome accession: NC_012926
Putative virulence/resistance : Unknown
Product : hypothetical protein
Function : -
COG functional category : R : General function prediction only
COG ID : COG3942
EC number : -
Position : 1016361 - 1019162 bp
Length : 2802 bp
Strand : +
Note : -

DNA sequence :
ATGAAAGAGGATAAAAAGGTAGTCAAACAGGCCAGGAAAAACTTTCGAAGCAACTTAAAATCAGCCCGTATGCATTATCG
GAAAGAAGTTAGGACCTTAAGACAGACTGTTCCTAAAAAAGGACGATTTCGTAAACCAGCCCAAAATTCTCTTTTTCAGG
AAAAGAAAACAGAGTTAAAAGAAAATCTACTCAGTAGCCAAAAAGAAGCAGAAGAGAAGTTCTTAAAGGGAATTACCTAT
GTGTCTCCTAGACTGTTGAAGGTAAAGGAAATCAAGAGGTATCGACTTCCGCAAGCTCAAGAGCGTTTGCGGACGGCAAG
AAAACATTTGTCAGAAGTGAAACTAAGTGAGAAGCAAAAGGCAGTTAATCCCAAGTTTACCTTCCAAAAAGATAAATCTT
CCTTGAAGTCTCGCTTTCAGTTTCATCAAGAAAAATCATTTGATCGACTCAGTGCAGAAAAAGAAGTGAGTTCTGCCAAA
CGTGAGGTCAAACAACTCAAGAAAGTCCAAAAGTCTAAGAAAAACTCTATCAAAGTCAAAGTTGGATTAGGCTTAGCTGC
ATCTGAATCGCTTGACTTGGTGGCACAGGATGATGATTTAGATGGTTTTAGAACCTTAAAGGATACCAGCTTGAAAGCCA
GACGCTATGGCAGGTTTACCTATCAAGCAGGTAAAGTGGCGGTGAAAAGTGGTCAGACTGGTGTGCATTTTACAAAGACG
AAAGTGGCTCATGGAAAGGAACGATTCCAGAATTTCAAAAAGGGAAAAGGATTCATACGCCAAAAACCTCTTAAACCACA
AAGACGCTACCAAACCTTTTTAAAGCATGCCAAAAAGCACAGTCTAGCAGGAGTTAAGGGGGTTGTCCAAGCCATTAAGG
GAAGTCTGACCTTCTTTTCTGCAATTGCGGGAAATCCTTTGACTTGGATTGTCTCAGGCATTCTCTTGATACTCCTTTTG
ATGATGAGCTTTTTCATGAGTGTCTCAGGTAGCAGTGTCATTCAACAAGATGAGATAGAATTGAGTAAGAGCTACACCCA
CATGACGTGGGAAGATGCGGAACATACTAGAACTAACGAAAAAGGAATTACCTATTACACCAAGATTGATGAGGTCATGG
TTTACATGAATCATCAATACCAAGACTACAAGCTTGACGATTTCATGGAAAAAAGTGGTGCGACCTACAAAGCATTTCTC
AGTCAAGTCTGGACGGACTTAAATGGTGGAGACTCTATTAAATCCATGTCTGACTTGTATAAAGAACCTGCTTACAAGCT
GTCAGATGAGGACCAAGAAGAACTAAAGGAGTTGACCGAAGAAGGCAACTATTTAGCCCTTCAAGAATTGGACAATCCTT
TTCAGGGACAGACTGATGAAGATAGTTTAAGTATGTTATACCGATATGGTTATGAGGTCATTGATGAAAAACCAACGCTT
CATCACCATATCATCTTAGAAGCAAAAGAAGGTCAAGTCATTGTGGCTCCGATGGATGGCAAGGTATCTCTTGATGGGGA
GAACGTTGTTTTGACATCTGGTAAGGGAGTCAATAAGACTAAACTAACCTTGTTTGGCATTCATTCAGGTCGAGTGAGTG
AACATCAACAAGTCATGGCAGGAGACATTATTGGTCAGACCAAGGATGGAACGGGTCTAAAAGTCACCTATCAAAAGGTT
GATGATGACACGAATAAGTTGGTCTATGTCAATCCAGCTTTTTACTTTCCAAAAGTGATTCAGGTTCAGACCACCATTCT
TCCAACTATTGGTCAGTTTGGTGGCGAAGAGTTCGAGAGAGCAAAGGCTATTTATGACTATCTTAAAAGTAAAGGTGTGA
CTAATCAAGCTATCGCAGCGATTCTAGGAAATTGGTCGGTAGAATCTTCTATTAATCCCAAGCGTGCGGAAGGCGACTAT
CTATCTCCTCCTATTGGTGCAACAGACAGTTCGTGGGAAGATGAGGGCTGGCTCTCACTCAATGGTCCAACTATATACAA
TGGACGTTACCCAAATATTCTCAAACGTGGTTTAGGCTTAGGCCAATGGACAGATACCGCAGATGGTTCACGCAGACATA
CCTTATTGCTCGAATATGCCAAAGGAAAACATCAAAAATGGTATGACTTAGAGTTACAACTGAATTTCATGTTGCATGGG
GATAGTCCTTATTACACCAACTGGTTAAAGGACTTCTTCAAAAATTCAGGAAGTCCAGCTAGTCTTGCCCAACTCTTTCT
CATTTACTGGGAAGGAAATAGTGGTGATAAGCTGCTTGAACGACAGACACGAGCCAGTGAGTGGTATTACCAAATTGAAA
AAGGCTTCAGTCAACTCAACGGTGGGACAGCACAAAGTGATCCAAAAGCACTTGAAGCTGTACGAGGAGATCTTTTTGAA
AACTCTATTCCAGGAGGTGGTGACGGTATGGGGTATGCCTACGGCCAATGTACTTGGGGCGTTGCAGCCCGCATCAACCA
ACTGGGTCTTAAACTCAAAGGTAAAAACGGTGAGAAGATTCCAATTATCAGTACCATGGGTAATGGCCAAGATTGGGTGC
GTACAGCCGAAAGTCTCGGTGGGGAAACTGGAACAAGTCCGCAAGCAGGAGCCATACTCTCATTTTCGGGTGGAGGACAT
GGCACACCAACAGAATACGGGCATGTGGCTTTCGTCGAAAAAGTCTACCCAGATGGCTCATTCCTTATCTCCGAAACCAA
CTATAATGGCAATCCAAACTACACCTTCCGTAGAATATCTGGAGTGGATAGTAGCTTGAGTTTTGCATATACGACGAAAT
AA

Protein sequence :
MKEDKKVVKQARKNFRSNLKSARMHYRKEVRTLRQTVPKKGRFRKPAQNSLFQEKKTELKENLLSSQKEAEEKFLKGITY
VSPRLLKVKEIKRYRLPQAQERLRTARKHLSEVKLSEKQKAVNPKFTFQKDKSSLKSRFQFHQEKSFDRLSAEKEVSSAK
REVKQLKKVQKSKKNSIKVKVGLGLAASESLDLVAQDDDLDGFRTLKDTSLKARRYGRFTYQAGKVAVKSGQTGVHFTKT
KVAHGKERFQNFKKGKGFIRQKPLKPQRRYQTFLKHAKKHSLAGVKGVVQAIKGSLTFFSAIAGNPLTWIVSGILLILLL
MMSFFMSVSGSSVIQQDEIELSKSYTHMTWEDAEHTRTNEKGITYYTKIDEVMVYMNHQYQDYKLDDFMEKSGATYKAFL
SQVWTDLNGGDSIKSMSDLYKEPAYKLSDEDQEELKELTEEGNYLALQELDNPFQGQTDEDSLSMLYRYGYEVIDEKPTL
HHHIILEAKEGQVIVAPMDGKVSLDGENVVLTSGKGVNKTKLTLFGIHSGRVSEHQQVMAGDIIGQTKDGTGLKVTYQKV
DDDTNKLVYVNPAFYFPKVIQVQTTILPTIGQFGGEEFERAKAIYDYLKSKGVTNQAIAAILGNWSVESSINPKRAEGDY
LSPPIGATDSSWEDEGWLSLNGPTIYNGRYPNILKRGLGLGQWTDTADGSRRHTLLLEYAKGKHQKWYDLELQLNFMLHG
DSPYYTNWLKDFFKNSGSPASLAQLFLIYWEGNSGDKLLERQTRASEWYYQIEKGFSQLNGGTAQSDPKALEAVRGDLFE
NSIPGGGDGMGYAYGQCTWGVAARINQLGLKLKGKNGEKIPIISTMGNGQDWVRTAESLGGETGTSPQAGAILSFSGGGH
GTPTEYGHVAFVEKVYPDGSFLISETNYNGNPNYTFRRISGVDSSLSFAYTTK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SSU05_0968 YP_001198334.1 Tn5252, Orf28 Not tested 89K Protein 0.0 93
SSU98_0981 YP_001200539.1 Tn5252, Orf28 Not tested 89K Protein 0.0 93
Spaf_1124 YP_006309926.1 putative conjugal transfer protein Not tested FWisland_1 Protein 0.0 60