|
Name : SSU0288 (SSU0288) Accession : YP_003026229.1 Strain : Streptococcus suis P1/7 Genome accession: NC_012925 Putative virulence/resistance : Resistance Product : cation-transporting ATPase Function : - COG functional category : P : Inorganic ion transport and metabolism COG ID : COG2217 EC number : - Position : 300270 - 302138 bp Length : 1869 bp Strand : - Note : - DNA sequence : ATGACACTCGTAACCAACCTCAAACAACACAGCCACATCATCACGACCGCTCTTTGCTTGGCGCTCATTCTAATAGGTAT CCTTCTGTTTCAGACTGGACAGGGATGGGCTCCTATCCTCTTCATTTCAGCCTTTGTCATCGGGGGCTACCAATCAGCCA AGGAAGGCATTTCTGAGCTGATTTTCGACAAGCACCTGTCTGTCGACCTGCTCATGATTTTAGCTGCTATCGGCTCTGGT CTAATTGGCTACTGGATGGAGGGGGCTCTACTCATCTTCATCTTCTCCCTTTCTTCTACTCTGGAAGAATTAGCCATGAA AAAAAGCAAGAATGCGATCGCTGCTTTGATGAACATGACCCCTCCAACAGCTCGCAAAATCGAGGAAAATGGTGACATTA CTGTCTTAGACACCGCAGCCATCCGCATTGGCGACCTCCTGCAAGTCCGCAAGGGTGACACGGTTCCACTGGATGCTACC CTCATCAGTCCGCAATCCATCTTTGACGAATCCATGATTACAGGCGAGCCGCTCCCTGCGGAGAAAATGGCTGGCGATGC TGTTATCGGCGGAACCATTAACCAAGGTCCAACTGTGACCGTACAAGTTACGGCTGAAAAAGGCGATGCCCTCTTCGATA AAATCGTCCAGATGGTTGAAAACGCCCAAGAATCCAAATCAAAAACAGCGACTTTCATTGAAAATATGGAAGATACCTAT GTCAAGGTTGTCTTGGTGGTGGTACCACTCTTCATCCTCCTTGCTCATTTTGCACTGGGCTGGGACTGGTTAACTGCCTT CTACCGAGGCATGATTCTCTTAACCATCGCTTCTCCTTGTGCCCTCGTAGCTTCTTCTTCACCCGCAACACTTTCTGCCA TCAGCCGTGCGGCACGTAAGGGCATGATTATCAAGGGCGGTGACATTGCGGACAACATCGCCAATCTAGAGGCCATCGTC TTTGATAAGACGGGTACCCTGACCATTGGTAAACCTGAAGTTGTAGGTGCGACCTATCTTGGCGATGAAGAGCTTATCAA GCAGGTTGTTCAGGCAGTTGAAAAACAATCAAGCCACCCAATCGCTCAGGCTCTCATGACCTATACGGCTGACAGCTCTG CTATTGCCCTTCAAAGCCTAGAAGACGTGACAGGAAAAGGCTTGGTGGCAGGCTATGAGGGCGACAGCTGGAAAATCGGT AAGGCGGGATTTGTGGCGGACAGCCTGGTGAGTCCCCTGTCTGCTGGCTTGCTGGCACAGATCGATGAGGCGGAAAGCAC TGGGAAAACCCTGGTCTATGTCAGCCAAAATGATGTGCTGGTGGCGATCTTCATGGTGGAAGATAGTTTGAAACCTGAGA GCAAGCAGCTGATTGCCCAGTTGAAAGAAATGGGCGTGACGCCAATTCTCTTGACGGGTGACCAAGAAAAGACGGCTCGT TACGTGGCGAGTCAGGTCGGTATTGACCGTGTGATTGCCAACTGTCTGCCGACGGATAAGGCTGCTGTTATCCAAGAATT ACAAACCGAGTTTGCGTCTGTCGGCATGGTCGGAGACGGCATCAACGACGCTCCCGCCCTGGCTCAAGCCAATGTCAGCT ATGCTATGGGAAGCGGAACGGACATCGCTATGGAGTCAGCTGACATCGTACTCATGGAAGACCTGACGAGAATTCCTTAC TCCATTCGTCTCTCTAAGAAAATGCGGGGCATCATCAAGCAGAACATCATCTTTGCGCTATCTGTCATTGCCCTTCTTAT CATCTCCAACCTCTTCCAGTCTATCAACCTCCCACTCGGTGTGGTGGGCCACGAAGGATCAACGATTTTGGTGATTTTGA ATGGGTTGAGACTATTGTATTTTAAATAG Protein sequence : MTLVTNLKQHSHIITTALCLALILIGILLFQTGQGWAPILFISAFVIGGYQSAKEGISELIFDKHLSVDLLMILAAIGSG LIGYWMEGALLIFIFSLSSTLEELAMKKSKNAIAALMNMTPPTARKIEENGDITVLDTAAIRIGDLLQVRKGDTVPLDAT LISPQSIFDESMITGEPLPAEKMAGDAVIGGTINQGPTVTVQVTAEKGDALFDKIVQMVENAQESKSKTATFIENMEDTY VKVVLVVVPLFILLAHFALGWDWLTAFYRGMILLTIASPCALVASSSPATLSAISRAARKGMIIKGGDIADNIANLEAIV FDKTGTLTIGKPEVVGATYLGDEELIKQVVQAVEKQSSHPIAQALMTYTADSSAIALQSLEDVTGKGLVAGYEGDSWKIG KAGFVADSLVSPLSAGLLAQIDEAESTGKTLVYVSQNDVLVAIFMVEDSLKPESKQLIAQLKEMGVTPILLTGDQEKTAR YVASQVGIDRVIANCLPTDKAAVIQELQTEFASVGMVGDGINDAPALAQANVSYAMGSGTDIAMESADIVLMEDLTRIPY SIRLSKKMRGIIKQNIIFALSVIALLIISNLFQSINLPLGVVGHEGSTILVILNGLRLLYFK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| cadA | YP_005732869.1 | cadmium-translocating P-type ATPase | Not tested | Type-V SCCmec | Protein | 2e-90 | 42 |
| SE0062 | NP_763617.1 | copper-transporting ATPase copA | Not tested | SCCpbp4 | Protein | 2e-90 | 42 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| SSU0288 | YP_003026229.1 | cation-transporting ATPase | BAC0092 | Protein | 1e-99 | 42 |
