|
Name : treA (SSU0216) Accession : YP_003026160.1 Strain : Streptococcus suis P1/7 Genome accession: NC_012925 Putative virulence/resistance : Unknown Product : trehalose-6-phosphate hydrolase Function : - COG functional category : G : Carbohydrate transport and metabolism COG ID : COG0366 EC number : - Position : 218246 - 219871 bp Length : 1626 bp Strand : - Note : - DNA sequence : ATGACAATAGACAAACGAAAGGTTGTTTATCAAATCTACCCAAAATCTTACAAGGATACAACTGGAAATGGTGTAGGGGA TTTACGAGGAATTATTGAAAAACTCCCATATTTAAAAGAGCTAGGTATTGATATGATTTGGCTCAATCCCTTCTACCCAA GTCCTCAGCGGGACAACGGCTATGATATTTCTGATTATACAGCTGTCAATCCTGATTTTGGCACCATGGCTGACTTTGAA GAAATGGTGACTGTCGGCAAAGAACTAGGCATCGAATTCATGCTAGACATGGTCCTCAATCACTGCTCAACCGACCACGA ATGGTTCCAAAAAGCCCTTGCCGGCGACAAATATTACCAAGATTTCTTTATCCTGCGTGACCAGCCAACTGACTGGGTGT CCAAGTTTGGTGGCAATGCCTGGGCTCCTTTTGGAGATACTGGGAAATACTACCTCCACCTCTTTGACGTGACCCAAGCC GACCTCAACTGGCGAAATCCTCATATCCGTGAAGAACTCTTCAAGGTGGTCAACTTCTGGAAAGACAAGGGTGTCAAAGG CTTCCGCTTCGACGTTATTAACCTGATTGGTAAGGACGAAGTCCTAGAAGATTGCCCAATTAATGACGGCAAGCCAGCTT ACACCGACCGCCCGATTACCCACGATTACCTCAAGATGATGAACAATGCTACTTTTGGTAGTGAAAAGGGCTTCATGACC GTTGGGGAAATGTCTGCCACCACCATTGAAAACTGTATCCTCTACACAGCTCCTGAACGGAAAGAATTGTCCATGGCCTT CAACTTCCACCACTTGAAAGTGGATTACAAGGACGGGCAAAAATGGACCATCATGGACTTTGACTTTGAAGAACTCAAAC ACCTCTTCCACACTTGGGGTGAAGAAATGTCCGTCGGAAATGGCTGGAACGCCCTTTTCTACAACAACCACGACCAACCT CGTGCCCTAAACCGCTTTGTTGATGTGGAGAATTTCCGCAAGGAAGGAGCAACCATGTTGGCAGCCTCTATCCACCTATC ACGCGGCACACCTTACATCTACATGGGTGAGGAGATCGGTATGATCGACCCTGACTACGATAGCATGGACGACTACGTGG ACGTGGAGTCTATCAATGCCTACCAGATGCTCTTGGACCAAGGTCACACGCCTAAGCAGGCCTTCAAGATTATCCAGGCC AAGTCCCGTGACAATTCCCGCACCCCGATGCAATGGGACGCTTCTGACAATGCAGGCTTCTCAACAGGCACTCCTTGGTT GAAAGCTGGCAAATCCTACCAAACGATTAACGTTGAACAGGAAAAAACAGGCCCAATCTTTACCTTCTACCAAGAACTCA TCCGCCTGCGGAAAGAACTCCCTCTGATTTCAGAAGGGGACTACAAGGCAGCCTACAAGGATAGCCAGAAAGTCTACGCC TTTGAACGCTTGCTAAATGACGAAAAACTGTTGGTCCTCAACAATTTCTTTGCAGAAGAGGTCGAATTAGACCTGGCAGA CGACTATGCCCACGGCCAAGTCCTCATCAGCAACTATCCTGACAACAAACTAGGCAAAAAAATCATTCTCAAACCTTACC AAGCATTGGCGATTCAAGTTAAATAA Protein sequence : MTIDKRKVVYQIYPKSYKDTTGNGVGDLRGIIEKLPYLKELGIDMIWLNPFYPSPQRDNGYDISDYTAVNPDFGTMADFE EMVTVGKELGIEFMLDMVLNHCSTDHEWFQKALAGDKYYQDFFILRDQPTDWVSKFGGNAWAPFGDTGKYYLHLFDVTQA DLNWRNPHIREELFKVVNFWKDKGVKGFRFDVINLIGKDEVLEDCPINDGKPAYTDRPITHDYLKMMNNATFGSEKGFMT VGEMSATTIENCILYTAPERKELSMAFNFHHLKVDYKDGQKWTIMDFDFEELKHLFHTWGEEMSVGNGWNALFYNNHDQP RALNRFVDVENFRKEGATMLAASIHLSRGTPYIYMGEEIGMIDPDYDSMDDYVDVESINAYQMLLDQGHTPKQAFKIIQA KSRDNSRTPMQWDASDNAGFSTGTPWLKAGKSYQTINVEQEKTGPIFTFYQELIRLRKELPLISEGDYKAAYKDSQKVYA FERLLNDEKLLVLNNFFAEEVELDLADDYAHGQVLISNYPDNKLGKKIILKPYQALAIQVK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| malL | YP_251987.1 | oligosaccharide alpha-1,6-glucosidase | Not tested | SCCmec | Protein | 1e-104 | 43 |
