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Name : polA (SSU1208) Accession : YP_003027063.1 Strain : Streptococcus suis P1/7 Genome accession: NC_012925 Putative virulence/resistance : Unknown Product : DNA polymerase I Function : - COG functional category : L : Replication, recombination and repair COG ID : COG0749 EC number : - Position : 1231482 - 1234118 bp Length : 2637 bp Strand : - Note : has 3'-5' exonuclease, 5'-3' exonuclease and 5'-3'polymerase activities, primarily functions to fill gaps during DNA replication and repair DNA sequence : ATGAAAAAAAATAAATTATTATTAATCGATGGCTCTTCTGTAGCCTTCCGTGCCTTCTTTGCACTCTATAACCAAATCGA CCGCTTCAAGAATGCCAACGGTCTGCATACCAACGCCATTTACGGCTTCAATCTCATGCTGGACCACATGATGAAGCGGA TTGAGCCGACCCACATTCTTGTGGCTTTTGATGCTGGAAAGACCACTTTCCGTACGGAGATGTATGCAGACTATAAGGCA GGTCGTGCCAAGACTCCAGACGAATTCCGTGAGCAGTTTCCTTTTATCCGTCAGATGTTGGATGCCATGGGAGTCAAGCA TTACGAACTGGATCAGTATGAGGCAGACGATATTATCGGTACCTTGGACAAAATGGCAGAGCGGACAGACATCCCTTTCG ATGTGACCATTGTTAGCGGTGATAAGGATTTGATCCAGCTGACTGATGAGAACACCGTAGTCGAAATTTCCAAGAAAGGC GTTGCCGAATTCGAAGAATTTACCCCAGCCTACCTCATGGAAAAAATGGGGATTAGCCCTACTCAGTTTATTGACCTCAA GGCTTTGATGGGAGATAAGTCCGATAACATTCCTGGCGTGACCAAAATCGGTGAAAAAACAGGTCTAAAACTCCTGACAG AATTTGGTTCTTTGGATGGTATCTACGAAAACATTGACAGCATGAAGGCTTCTAAGATGAAAGAAAACCTGATTGCTGAT AAGGAGAAGGCCTTCCTATCTCGTACACTTGCTACCATTGATACTCAGGCACCAATCGAAATTGGTCTGGATGACATTGT TTATCAAGGCCCCAAGGTGGATGAACTGGGACAATTTTATGATGACATGGGCTTCAAACAATTAAGGGCTCAGTTAGGTA CGACCAGCTCGCAAGAGGAAGCGGTGCTCGATTTCCAAATCGTAACGGAAATCAGCCCCGCTATGCTCAAACAAGACCAG TTTTTCTATTTTGAAATCTTGGGTGAAAATTATCACCGAGAGGATTTGGTTGGTTTAGCTTGGGGAGATAAGGAGAAAAT CTATGTCGGAGGGCCTGAGCTACTTGATAGTCCAGTCTTGCGTGACTTTTTAGAAAGCCAAACCATAAAAACCTATGACT TTAAGCGTGGAAAAGTTCTTCTCGACCGAAAAGAGATTAAGCTACCTCCAGCTACTTTCGATAGCCGTCTAGCCAAATAC TTGCTTTCCACCGTTGAGGACAATTCCCTAACAACCATTGCCAACCTCTATGGTCAGACCAGTCTTGTTCCAGATGAGGC AGTTTATGGCAAGGGTGCTAAGTTAGACTTGCCAGAACGCGAGATCTTTTTCCCACACTTGGCACGTAAGGTTCAGGTTT TGATTGAGACAGAAGAGCCGATGTTGACCAAATTAGAAGAAAATCAGCAATTAGATCTTTTGTTTGACATGGAGTTGCCA CTAGCAAATGTTTTAGCTAAGATGGAAATTGCTGGTATTAAAGTGGAAGCTGAGACTCTCAAAGCTATGCAATCTGAAAA CGAAGTTTTGATTGACCAGTTGACCAAGGAAATCTATGAACTAGCTGGTCAGGAATTTAATATCAATTCGCCTAAGCAGC TTGGGACCATTCTCTTTGAAGATATGGGACTACCATTGGAATATACCAAGAAAACCAAGACAGGCTATTCAACAGCAGTA GATGTCTTAGAACGATTAGCGCCAATTGCACCAGTTGTTTCAAAAATCTTGGAATACCGTCAGATTACCAAGCTTCAATC AACTTATGTAGTCGGCTTGCAGGATGCCATTTTAGAAGATGGTAAGATCCATACCCGCTATGTACAGGATTTGACACAAA CAGGTCGTCTATCTTCAACGGACCCTAACTTGCAAAATATTCCTGTTCGTCTAGAACAAGGGCGCTTGATTCGTAAGGCA TTTGTGCCATCGCTTGAAAATAGTGTCCTTTTGGCATCGGACTATTCACAGATTGAATTGCGCGTCTTGGCTCATATTTC TCAGGACCAGCATTTGATTGAGGCCTTCCAGCAAGGTGCAGATATTCACACTTCGACAGCTATGCGGGTCTTCGGTATCG AAAAAGCTGAGTATGTGACACCAAATGACCGTCGGAATGCCAAGGCTGTAAACTTCGGTGTCGTCTATGGTATTTCAGAT TTCGGTTTATCTAATAACTTGGGGATTACACGTAAGGAAGCTAAAGCCTATATCGATACCTATTTTGAACGCTTCCCAGG AATTAAGAATTACATGGAAACCATTGTTCGTGAGGCACGTGATAAGGGGTATGTAGAGACGATTTACAAACGCCGTCGTG AATTACCAGATATAAACTCTCGCAATTTCAATGTCCGTAATTTTGCGGAACGAACAGCCATCAACTCACCAATTCAAGGT TCGGCCGCAGATATTCTCAAAGTAGCCATGATTAATCTCGACAAGGCTTTGACTGAAGCAGGTCTTGCGACACGTATGTT ATTGCAAGTACACGATGAGATTGTTTTGGAAGTCCCAGTGGCAGAGCTAGAAACGGTAAAAGCCATGGTAAAAGAGACTA TGGAATCGGCGATTAGCCTGTCTGTACCATTGATTGCGGATGAAAATGAAGGTTCAACATGGTATGAAGCAAAGTAA Protein sequence : MKKNKLLLIDGSSVAFRAFFALYNQIDRFKNANGLHTNAIYGFNLMLDHMMKRIEPTHILVAFDAGKTTFRTEMYADYKA GRAKTPDEFREQFPFIRQMLDAMGVKHYELDQYEADDIIGTLDKMAERTDIPFDVTIVSGDKDLIQLTDENTVVEISKKG VAEFEEFTPAYLMEKMGISPTQFIDLKALMGDKSDNIPGVTKIGEKTGLKLLTEFGSLDGIYENIDSMKASKMKENLIAD KEKAFLSRTLATIDTQAPIEIGLDDIVYQGPKVDELGQFYDDMGFKQLRAQLGTTSSQEEAVLDFQIVTEISPAMLKQDQ FFYFEILGENYHREDLVGLAWGDKEKIYVGGPELLDSPVLRDFLESQTIKTYDFKRGKVLLDRKEIKLPPATFDSRLAKY LLSTVEDNSLTTIANLYGQTSLVPDEAVYGKGAKLDLPEREIFFPHLARKVQVLIETEEPMLTKLEENQQLDLLFDMELP LANVLAKMEIAGIKVEAETLKAMQSENEVLIDQLTKEIYELAGQEFNINSPKQLGTILFEDMGLPLEYTKKTKTGYSTAV DVLERLAPIAPVVSKILEYRQITKLQSTYVVGLQDAILEDGKIHTRYVQDLTQTGRLSSTDPNLQNIPVRLEQGRLIRKA FVPSLENSVLLASDYSQIELRVLAHISQDQHLIEAFQQGADIHTSTAMRVFGIEKAEYVTPNDRRNAKAVNFGVVYGISD FGLSNNLGITRKEAKAYIDTYFERFPGIKNYMETIVREARDKGYVETIYKRRRELPDINSRNFNVRNFAERTAINSPIQG SAADILKVAMINLDKALTEAGLATRMLLQVHDEIVLEVPVAELETVKAMVKETMESAISLSVPLIADENEGSTWYEAK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| polA | YP_281523.1 | DNA polymerase I | Not tested | Not named | Protein | 0.0 | 74 |
