Gene Information

Name : SSUSC84_0854 (SSUSC84_0854)
Accession : YP_003024866.1
Strain : Streptococcus suis SC84
Genome accession: NC_012924
Putative virulence/resistance : Resistance
Product : lantibiotic transport ATP-binding protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1131
EC number : -
Position : 919302 - 920216 bp
Length : 915 bp
Strand : -
Note : -

DNA sequence :
ATGGATATACATTTAAATCATATAAGTAAGAAATATGGTAATCGAATCATTTTAAACGATGTCACTATTAGGATTCCTTC
AGGGAAAATTTATGGGTTTATTGGTGCTAATGGAGCTGGTAAAACTACAACGATGAAAATCCTTACTGGATTACTACCTG
CTACAAAAGGTAACATATACTTTGACGGTGTAAGTCTTAACGACTTAAAAAATCAGGAGTCAATAATAGGAGCTTTTATT
AGTACACCAAGTTACTATAAAAACTTAACAGCTTATGAAAACTTAGCTATTATACAAGAAGTTCTCAAAAAACCGCAAGA
AGAAATTGATCGAGTTTTGAATCTGGTGGGCCTAAGTGAGGTTCGCAATAAAGTTGTGTCTTCGTTCTCATTTGGTATGA
AACAACGTCTTGGTTTAGCATTTGCTTTTTTAAATAATCCAGATATATTGGTATTAGATGAACCTACGAATGGATTAGAT
CCGAAAGGAATTGTTGAAATCAGAGAACTCTTATACAGACTAGCTAAAGAAGAAGGAAAAACGATTTTTATATCAAGTCA
CCATATTAGTGAAATAGAAACGATTGCAGATATGGTCGGTATAATACATGACGGTGAGCTTATTTTTGAGGGAACACTCT
CTGAACTTTATAATAAAAGGGACAGCTCTTATCTTTTTGAAGTCGCAAATCCAGATGTTTTTGAACATATTTTGAAAGTT
CGAGATATCTCATTTATTCGAAAAGAATCACATTTTGAAATAAATTCTTACAAAAAAGATATACCAAATTTAATAAAATT
CATTGTACAAGAAGGAATCGATATTTTGGAGGTTTCACCAAATAAAAACCTAGAAAGAATCTTCTTAGACTTAACGAAAG
GAGATAAAGTGTATGGTCACATTGATAAAAAATGA

Protein sequence :
MDIHLNHISKKYGNRIILNDVTIRIPSGKIYGFIGANGAGKTTTMKILTGLLPATKGNIYFDGVSLNDLKNQESIIGAFI
STPSYYKNLTAYENLAIIQEVLKKPQEEIDRVLNLVGLSEVRNKVVSSFSFGMKQRLGLAFAFLNNPDILVLDEPTNGLD
PKGIVEIRELLYRLAKEEGKTIFISSHHISEIETIADMVGIIHDGELIFEGTLSELYNKRDSSYLFEVANPDVFEHILKV
RDISFIRKESHFEINSYKKDIPNLIKFIVQEGIDILEVSPNKNLERIFLDLTKGDKVYGHIDKK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SSU05_0946 YP_001198312.1 hypothetical protein Not tested 89K Protein 4e-131 100
SSU98_0954 YP_001200512.1 hypothetical protein Not tested 89K Protein 4e-131 100
cdd4 CAA63569.1 - Not tested PaLoc Protein 5e-43 42
sboF YP_006309913.1 SboF Not tested FWisland_1 Protein 5e-38 41
DIP0090 NP_938487.1 ABC transporter ATP-binding protein Not tested Not named Protein 9e-32 41
CD241_0087 YP_005124356.1 ABC transporter ATP-binding protein Not tested Not named Protein 7e-32 41