Gene Information

Name : SSUSC84_0815 (SSUSC84_0815)
Accession : YP_003024829.1
Strain : Streptococcus suis SC84
Genome accession: NC_012924
Putative virulence/resistance : Unknown
Product : ABC transporter ATP-binding protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1132
EC number : -
Position : 879059 - 881281 bp
Length : 2223 bp
Strand : -
Note : Possible alternative translational start sites

DNA sequence :
ATGGATATGCAGCTCAATCAAGAGTCATACTCCTATGTTCAGCTAAAGTACAGATTACTAGCGCAAATAGCTTTACTAAT
CTCTTATCCGCTTACAAAGCTCTCGCCTACAAGAATTGAATTTTTGATTAATAAATTAAGTGACTCAAAATTATCCGCAA
CAGTAAATGAAGCTGTATTAGCTCGTGATGCAATATGTACTGTAAGCCGTAAGTGTAGGAATCAAGATGGATGCGTAAAA
AGATCATTAGGAGTAATAATGTTCTTACTTCTTTTAAAGAAACGTGCAAGTTGGTGTACTGGATTTGCTATGAACCCCTT
TAGATCTCATGCATGGGTGGAAGTCAATGGAAATCCGATTAAAGAGCTAGAAGAAGTATCATCGTATGAAAGAGTTGTGA
AAACTCTAGATGATAAAAATGAAGAGCGTAAACATATGATAACTGAAGATATAGAAAAAGTAAATGATACTATGACTAAT
GTAAAATTCCGTGATTTACTTGCCTTGATAGAAAATAAAAGAAAATATTTTTTAATCGTTTTATGTTTGGGAATACTTAC
GTCCATTTTAACGTTATTACAGCCAGAACTTTTGTCTAAAGTAATCTCTCAAAAGGGAGTAAATTTATTCAATAATTCCA
CTATGTATACGCTTATTGCTATTACCGTGGGTACAACTATTATTTCCAGTTTGCAATATTATTTCTTACAATTAATGGGA
GAAAGTGCAGTATTTCAATCAAGAAAAAATTTAATTATTCAATTTCTTAAACTTCCCATTTATAAATATAATGATCTGTC
AGCAGGAGACCTAATTAGTCGATTTAGCAGTGATACAAGTAAGCTAAGAGCGGGAATCATTCAATCAACCGTTGCTCTGA
CGAGTGGATTGTTCTTGAGTTTAGGTGCGATATTTACATTATTTCTAAAGGATACATATCTTGCAATAATTACAATTATT
TCCATATCTTTATCATTCCTATTTATTTTATTGATGAGTAGTTTGATTCAAACAGCAAGTTATAAAGCTCATCAGGGTTT
GGGGAAAATGACAGCATACTTAAATAGGCTAATCGTAGGAATTAGAACAATTCGATCGACAAATGAAACGAATTCAGAAT
TATCTAAAATGTTATCTGAGGTACAAGAAGTAAAAAACTTGGGAATTGGAGTTGCAAGAGTGCAGTCAATAATGACACCG
ATATCAAATTTTAGCTTGCAGTTGTGTGGGATAATTATTTTGGGAGTCGGAGGATACCGTGTTTCTACTGGGCAAATGTC
TATTGCAAGTCTAACTTCTTTTATGCTATTAATGTATATCGCTATTTCACCAGTAGGACAAATATTTTCATCGGTCACAA
CTATTTCAGAAGCTTTAGGAGCTTTAGGTAGAATTACTGAAATTATTGATCTTCCAAAAGAAGAAGATAATGATATCATT
TTAAATCTAGAAACTAAGTCGGATAGAAGCAAAGCAATTGAATTTGCGAATGTAACTTTTTCATATGATTCTTACAAATT
TCAGGATATTCAATCGGATGATAATTATATATTAAAGGACATTACTTTCGAAATAAATAGTGGAGATTACGTCAGTATTG
TCGGTCCGTCTGGTGCGGGGAAAAGCACACTTCTTTATCTCATCGAAAGATTCTATGATATTACTAGTGGTAGTATAAAG
GTATTTGGACAAGATTTCCGAACAATGAGTCGCGAGACTTTACGTTCTAATATTTCTTATGTTGAGCAAAACTCACCATT
AGTAGCTGGTACAATTTTAGAAAATCTAAAAATGGGTAATACTAATGTAACATATGATGAATGTTGTGACGCTTTAAAAA
AAGTTGGCTTGGAGCATTTGATTCAAAGAGGTGCATCTGGGGTTGAGAGTCAAATTGGTGAAGGAGGTTTCAATTTATCA
GGAGGAGAAAGACAGAGATTGGCAATGGCAAGAGCAATACTTTCTGATGCAAAGATACTCTTGCTGGATGAGTTAACTTC
GAATCTAGATAGTCTTAGTGAGAAGAAGATGAAGGAAGCAATCAAAAATATGAGAGGTGAGAGAACCATAATAATGGTTG
CTCATAGATTATCTACAATTTTAGATTCAGATGAAATCTTTGTTTTGGAACACGGAAGACTTGTAGGAAGTGGGACTCAT
GTGGAGCTATTGGAATCTGTTCCATTATATAAAGAGTTGGCCAAAGAACAATTTTTAGTATAG

Protein sequence :
MDMQLNQESYSYVQLKYRLLAQIALLISYPLTKLSPTRIEFLINKLSDSKLSATVNEAVLARDAICTVSRKCRNQDGCVK
RSLGVIMFLLLLKKRASWCTGFAMNPFRSHAWVEVNGNPIKELEEVSSYERVVKTLDDKNEERKHMITEDIEKVNDTMTN
VKFRDLLALIENKRKYFLIVLCLGILTSILTLLQPELLSKVISQKGVNLFNNSTMYTLIAITVGTTIISSLQYYFLQLMG
ESAVFQSRKNLIIQFLKLPIYKYNDLSAGDLISRFSSDTSKLRAGIIQSTVALTSGLFLSLGAIFTLFLKDTYLAIITII
SISLSFLFILLMSSLIQTASYKAHQGLGKMTAYLNRLIVGIRTIRSTNETNSELSKMLSEVQEVKNLGIGVARVQSIMTP
ISNFSLQLCGIIILGVGGYRVSTGQMSIASLTSFMLLMYIAISPVGQIFSSVTTISEALGALGRITEIIDLPKEEDNDII
LNLETKSDRSKAIEFANVTFSYDSYKFQDIQSDDNYILKDITFEINSGDYVSIVGPSGAGKSTLLYLIERFYDITSGSIK
VFGQDFRTMSRETLRSNISYVEQNSPLVAGTILENLKMGNTNVTYDECCDALKKVGLEHLIQRGASGVESQIGEGGFNLS
GGERQRLAMARAILSDAKILLLDELTSNLDSLSEKKMKEAIKNMRGERTIIMVAHRLSTILDSDEIFVLEHGRLVGSGTH
VELLESVPLYKELAKEQFLV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SSU05_0911 YP_001198277.1 ABC transporter Not tested 89K Protein 0.0 100