Gene Information

Name : arcB (SSUSC84_0557)
Accession : YP_003024586.1
Strain : Streptococcus suis SC84
Genome accession: NC_012924
Putative virulence/resistance : Unknown
Product : ornithine carbamoyltransferase
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG0078
EC number : 2.1.3.3
Position : 605024 - 606037 bp
Length : 1014 bp
Strand : +
Note : catalyzes the formation of ornithine and carbamylphosphate from citrulline in the arginine catabolic pathway

DNA sequence :
ATGACAAACGTATTTAAAGGTAGACATTTCCTTGCAGAGAAAGATTTCACACGCGCAGAATTGGAATGGTTGATTGATTT
CTCAGCTCATTTGAAAGATTTGAAAAAACGCAATATTCCACACCGTTATTTGGAAGGTAAAAATATTGCTCTCTTGTTTG
AAAAAACATCAACACGTACTCGTGCTGCCTTCACAGTAGCATCTATTGACCTTGGTGCCCATCCAGAATATCTTGGTGCA
AATGACATCCAACTTGGTAAGAAAGAATCTACAGAAGATACTGCTAAAGTTTTGGGACGTATGTTCGACGGTATTGAATT
CCGTGGTTTCAGTCAAAAAATGGTGGAAGAATTGGCAGAATTCTCCGGTGTGCCAGTATGGAATGGTTTGACAGATGCAT
GGCACCCAACTCAAATGTTGGCGGACTACTTGACTGTCAAAGAAAACTTTGGCAAGTTGGAAGGCTTGACTCTGGTTTAC
TGTGGTGATGGCCGTAACAATGTTGCTAACTCACTTTTGGTAACAGGCGCTATCCTTGGTGTCAATGTCCATATCTTCTC
TCCAAAAGAACTCTTCCCAGAAGAAGAAGTAGTTGCCTTGGCTGAAGGTTTTGCGAAAGAAAGTGGAGCACGTGTTCTCA
TTACTGACAATGCTGACGAAGCAGTCAAAGGCGCAGATGTTCTCTATACAGACGTTTGGGTATCAATGGGTGAAGAAGAT
AAATTTGCTGAACGCGTTGCCCTCTTGAAGCCATACCAAGTGAATATGGAATTGGTGAAAAAAGCAGAAAATGAAAATCT
CATCTTCTTGCACTGCTTGCCTGCCTTCCATGATACAAACACTGTTTATGGTAAAGATGTCGCTGAAAAATTCGGCGTAG
AAGAAATGGAAGTAACAGACGAAGTATTCCGTAGCAAGTATGCTCGTCACTTCGACCAAGCTGAAAACCGTATGCACACT
ATTAAAGCAGTGATGGCGGCTACTTTAGGGGATCCATTTGTTCCACGTGTGTAA

Protein sequence :
MTNVFKGRHFLAEKDFTRAELEWLIDFSAHLKDLKKRNIPHRYLEGKNIALLFEKTSTRTRAAFTVASIDLGAHPEYLGA
NDIQLGKKESTEDTAKVLGRMFDGIEFRGFSQKMVEELAEFSGVPVWNGLTDAWHPTQMLADYLTVKENFGKLEGLTLVY
CGDGRNNVANSLLVTGAILGVNVHIFSPKELFPEEEVVALAEGFAKESGARVLITDNADEAVKGADVLYTDVWVSMGEED
KFAERVALLKPYQVNMELVKKAENENLIFLHCLPAFHDTNTVYGKDVAEKFGVEEMEVTDEVFRSKYARHFDQAENRMHT
IKAVMAATLGDPFVPRV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
argF YP_493760.1 ornithine carbamoyltransferase Not tested vSa¥ã Protein 6e-84 58
argF NP_371693.1 ornithine carbamoyltransferase Not tested vSa¥ã Protein 5e-84 58
argF NP_374285.1 ornithine carbamoyltransferase Not tested vSa¥ã Protein 5e-84 58
argF NP_645867.1 ornithine carbamoyltransferase Not tested vSa¥ã Protein 4e-84 58
arcB1 YP_186044.1 ornithine carbamoyltransferase Not tested vSa¥ã Protein 6e-84 58
SAKOR_01090 YP_008491278.1 Ornithine carbamoyltransferase Not tested vSa¥ã Protein 5e-84 57
SE0103 NP_763658.1 ornithine carbamoyltransferase Not tested SCCpbp4 Protein 8e-85 57