Gene Information

Name : srtC1 (SSUSC84_0412)
Accession : YP_003024457.1
Strain : Streptococcus suis SC84
Genome accession: NC_012924
Putative virulence/resistance : Unknown
Product : sortase SrtC1
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG3764
EC number : -
Position : 463867 - 464736 bp
Length : 870 bp
Strand : +
Note : Orthologue of S. suis P17 (AM946016) SSU0428

DNA sequence :
ATGATCAAATGGCTCAAAAAGAAAGGTCCGTCTTTTATCATGCCATTAATTTTTATATTGGGGATTGGACTATTGGCTTA
TCCATCGGTCAGTGATTACTGGAATTCCTTCCACCAATCAGAGGCCATCATGTCCTATTCTGACACAGTATCAGATATGA
CAGCTGACCAATACAAAGAAATCATTGATAGTGCGCGCCAGTATAATCAAGAAAAACCCTTAAACTGGAATGTGACTGCA
TCCGACATTGAAGCCTACAATCAGGAATTGAATTTCAATAAAGATGGCATCATGGGCTATATTGAGATTCCTAAAATTGA
TGTCAAGTTATCTATATTTCATGGGACAGACGAAACGGTTTTAGAGACTTCTATTGGACATCTAGAAGGAACATCGTTGC
CTGTAGGAGGTTTGGGAACTCATAGTGTACTTTCAGGGCATCGTGGGCTCCCATCTGCCCGTCTGTTTTCTGATTTAGAT
AAGTTGAGAGAAGGCGATATATTTACCATTCACGTTCTCAATGAAACACTAACTTACAAAGTGGACCAGATTCGAGTGGT
TGAGCCATCAGATTTATCGGCTCTTACCATGGAACCTCAGAAAGACTTATTGACTTTGGTAACCTGTACACCCTACGGTA
TTAATACACATAGGCTATTAGTTCGTGGCTATCGTATTGAAAATGTTAATGGTAGTGCTTTGGTTACCTCTGATGCTATC
CAAATTAAAGCAATTTTTATTGCTCCATTTATCGCAACTCCAATTCTATTTGTAATCTTAATTTATATTTTTATAACAAC
TAGTAAAACATTTCGTTCTCGGAATAGGAATCAAGTGTTGGATGATTTTTTAGTTCCCAAGAAATTTTGA

Protein sequence :
MIKWLKKKGPSFIMPLIFILGIGLLAYPSVSDYWNSFHQSEAIMSYSDTVSDMTADQYKEIIDSARQYNQEKPLNWNVTA
SDIEAYNQELNFNKDGIMGYIEIPKIDVKLSIFHGTDETVLETSIGHLEGTSLPVGGLGTHSVLSGHRGLPSARLFSDLD
KLREGDIFTIHVLNETLTYKVDQIRVVEPSDLSALTMEPQKDLLTLVTCTPYGINTHRLLVRGYRIENVNGSALVTSDAI
QIKAIFIAPFIATPILFVILIYIFITTSKTFRSRNRNQVLDDFLVPKKF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
srtB YP_005137208.1 putative fimbrial associated sortase-like protein Not tested Not named Protein 2e-41 44
srtC YP_005137206.1 putative fimbrial associated sortase-like protein Not tested Not named Protein 9e-43 43
DIP2012 NP_940343.1 fimbrial associated sortase-like protein Not tested Not named Protein 8e-37 42