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Name : clpL (SSUSC84_0338) Accession : YP_003024386.1 Strain : Streptococcus suis SC84 Genome accession: NC_012924 Putative virulence/resistance : Virulence Product : ATP-dependent protease ATP-binding subunit ClpL Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG0542 EC number : - Position : 372600 - 374699 bp Length : 2100 bp Strand : + Note : Orthologue of S. suis P17 (AM946016) SSU0352 DNA sequence : ATGAACAACAATTTCAATAACTTTAACAATATGGACGACATTTTCAATCAACTCATGGGCAACATGGGTGGCTACAGCAC AGAACGTCGCCGTTATTCTATCAATGGGCGTGAAGTGACACCAGAAGAATTTGCTATGTACCGTCAGACTGGTCGCCTGC CACAGACAGAAGAAGTGGCTCAAACACAGGCTAAAGGTCAGATAAAGTCAGACGGAATTCTTGCAAAACTTGGTCGCAAT TTGACACAAGATGCGCGTGAAGGTAAGTTGGATCCAGTCATTGGACGAAACAAGGAAATCCAAGAAACCTCTGAAATCCT AGCTCGCCGTACGAAAAATAATCCTGTTTTGGTCGGTGATGCTGGTGTCGGAAAGACAGCGGTAGTAGAAGGATTGGCTC AAGCCATTGTCAATGGTGATGTGCCAGCAGCCATTAAGAACAAGGAAATCATCTCCATCGACATTTCAGGCTTGGAGGCT GGGACTCAGTATCGTGGAGCTTTTGAGGAAAATGTGCAGAATCTTGTGGATGAAGTCAAAAAAGCTGGAAATATCATTCT CTTCTTTGATGAAATTCATCAGATTTTGGGAGCTGGTAGCACTGGCGGAGACTCAGGTTCCAAGGGTTTAGCGGATATTC TCAAACCAGCTTTATCCCGTGGGGAATTGACGGTTATCGGTGCCACTACACAGGACGAATACCGCAATACTATTCACAAG AATGCTGCTCTGGCTCGTCGTTTCAATGAAGTCAAGGTCAATGCTCCGTCCGCAGAGGACACCTACCAGATTTTGAAAGG GATTAAGCCGCTTTATGAAGCCCACCACAATATTGAATTGCCAGATGAGGTTTTGAGAGCTGCGGTTGATTATTCCGTCC AATATATTCCACAACGTAGCTTGCCTGATAAGGCTATTGACCTAGTCGATGTGACCGCTGCACATTTGGCTGCACAACAT CCTGTGACAGATATTCAGACCTTAGAAGCAGAAATGGCTGAGGCAAAACAGTTGCAGTTGGAAGCAGCTGAAAAAGAGGA TTATGAAAAAGCCTTGAATGAAAAAGTCCGTATTGATAAGCTACAAAAACAGATTGATAATCATACGGAGCAACAGAAAG TGGTGGCGACTGTTAATGATGTGGCTCAGGCGGTTGAGCGGATGACAGGAATTCCAGTCTCTCAAATGGGAGCTTCTGAC ATTGAACGACTCAAGGAATTGAAAAATCGTCTGGCAGCAAACGTTATCGGTCAAGACGATGCGGTGGAAGCTGTATCTCG TGCCATTCGTCGGAATCGTGCAGGTTTTGATGATGGCAACCGTCCAATTGGTTCCTTCCTCTTTGTTGGTCCGACAGGTG TGGGTAAGACAGAGTTGGCAAAACAGTTAGCACTAGACTTGTTTGGTAACAAGGATGCCATTATTCGTTTGGATATGTCT GAATACAGCGATCGGACAGCCGTTTCCAAATTAATCGGTACCACAGCTGGCTACATTGGCTACGATGACAATTCCCATAC TCTTACCGAGCGCGTCCGCCGCAATCCGTACTCAATCGTTCTTATGGATGAGATTGAAAAAGCTGATCCACAAGTGATTA CCCTTCTCTTGCAAGTGCTAGATGATGGGCATTTGACTGATGGACAGGGCAACCAAGTTAACTTTAAAAATACCATTATT ATCGCGACTTCTAATGCAGGTTTTGGTTATGGAATGGCAGAAGGTGAAGAAAATCAAGACATCATGGACCGCATCGCACC ATTCTTCCGCCCAGAGTTTCTCAATCGTTTTAACGCAGTCATCGAGTTCAAGCATTTGGATAAAGATGATCTCAAAGCCA TTGTAGAATTACTCTTGGCCCAGGTCAATAATACCCTGGCGAAGAAAGGCATCCAATTAACGGTAACGGAAGCTGCCAAA GAATTCTTGATGGAAGAAGGCTATGACAAGGCCATGGGAGCCCGTCCTCTGCGCCGTGTGATTGAAAATCAGATTCGTGA TAAGGTGACGGATTTCTATTTGGATCATGTTGATGTCAAATATCTGGAAGCGGATGTGGTTGATGGAAGCATCCAAATAA AAGAGCAAAGCTTTGCTTAA Protein sequence : MNNNFNNFNNMDDIFNQLMGNMGGYSTERRRYSINGREVTPEEFAMYRQTGRLPQTEEVAQTQAKGQIKSDGILAKLGRN LTQDAREGKLDPVIGRNKEIQETSEILARRTKNNPVLVGDAGVGKTAVVEGLAQAIVNGDVPAAIKNKEIISIDISGLEA GTQYRGAFEENVQNLVDEVKKAGNIILFFDEIHQILGAGSTGGDSGSKGLADILKPALSRGELTVIGATTQDEYRNTIHK NAALARRFNEVKVNAPSAEDTYQILKGIKPLYEAHHNIELPDEVLRAAVDYSVQYIPQRSLPDKAIDLVDVTAAHLAAQH PVTDIQTLEAEMAEAKQLQLEAAEKEDYEKALNEKVRIDKLQKQIDNHTEQQKVVATVNDVAQAVERMTGIPVSQMGASD IERLKELKNRLAANVIGQDDAVEAVSRAIRRNRAGFDDGNRPIGSFLFVGPTGVGKTELAKQLALDLFGNKDAIIRLDMS EYSDRTAVSKLIGTTAGYIGYDDNSHTLTERVRRNPYSIVLMDEIEKADPQVITLLLQVLDDGHLTDGQGNQVNFKNTII IATSNAGFGYGMAEGEENQDIMDRIAPFFRPEFLNRFNAVIEFKHLDKDDLKAIVELLLAQVNNTLAKKGIQLTVTEAAK EFLMEEGYDKAMGARPLRRVIENQIRDKVTDFYLDHVDVKYLEADVVDGSIQIKEQSFA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| clpC | YP_005163377.1 | ATP-dependent Clp protease ATP-binding subunit | Not tested | Not named | Protein | 4e-132 | 46 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| clpL | YP_003024386.1 | ATP-dependent protease ATP-binding subunit ClpL | VFG0080 | Protein | 1e-147 | 48 |
| clpL | YP_003024386.1 | ATP-dependent protease ATP-binding subunit ClpL | VFG0079 | Protein | 5e-138 | 45 |
