Gene Information

Name : SSUSC84_0277 (SSUSC84_0277)
Accession : YP_003024329.1
Strain : Streptococcus suis SC84
Genome accession: NC_012924
Putative virulence/resistance : Resistance
Product : cation-transporting ATPase
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG2217
EC number : -
Position : 299835 - 301703 bp
Length : 1869 bp
Strand : -
Note : Orthologue of S. suis P17 (AM946016) SSU0288

DNA sequence :
ATGACACTCGTAACCAACCTCAAACAACACAGCCACATCATCACGACCGCTCTTTGCTTGGCGCTCATTCTAATAGGTAT
CCTTCTGTTTCAGACTGGACAGGGATGGGCTCCTATCCTCTTCATTTCAGCCTTTGTCATCGGGGGCTACCAATCAGCCA
AGGAAGGCATTTCTGAGCTGATTTTCGACAAGCACCTGTCTGTCGACCTGCTCATGATTTTAGCTGCTATCGGCTCTGGT
CTAATTGGCTACTGGATGGAGGGGGCTCTACTCATCTTCATCTTCTCCCTTTCTTCTACTCTGGAAGAATTAGCCATGAA
AAAAAGCAAGAATGCGATCGCTGCTTTGATGAACATGACCCCTCCAACAGCTCGCAAAATCGAGGAAAATGGTGACATTA
CTGTCTTAGACACCGCAGCCATCCGCATTGGCGACCTCCTGCAAGTCCGCAAGGGTGACACGGTTCCACTGGATGCTACC
CTCATCAGTCCGCAATCCATCTTTGACGAATCCATGATTACAGGCGAGCCGCTCCCTGCGGAGAAAATGGCTGGCGATGC
TGTTATCGGCGGAACCATTAACCAAGGTCCAACTGTGACCGTACAAGTTACGGCTGAAAAAGGCGATGCCCTCTTCGATA
AAATCGTCCAGATGGTTGAAAACGCCCAAGAATCCAAATCAAAAACAGCGACTTTCATTGAAAATATGGAAGATACCTAT
GTCAAGGTTGTCTTGGTGGTGGTACCACTCTTCATCCTCCTTGCTCATTTTGCACTGGGCTGGGACTGGTTAACTGCCTT
CTACCGAGGCATGATTCTCTTAACCATCGCTTCTCCTTGTGCCCTCGTAGCTTCTTCTTCACCCGCAACACTTTCTGCCA
TCAGCCGTGCGGCACGTAAGGGCATGATTATCAAGGGCGGTGACATTGCGGACAACATCGCCAATCTAGAGGCCATCGTC
TTTGATAAGACGGGTACCCTGACCATTGGTAAACCTGAAGTTGTAGGTGCGACCTATCTTGGCGATGAAGAGCTTATCAA
GCAGGTTGTTCAGGCAGTTGAAAAACAATCAAGCCACCCAATCGCTCAGGCTCTCATGACCTATACGGCTGACAGCTCTG
CTATTGCCCTTCAAAGCCTAGAAGACGTGACAGGAAAAGGCTTGGTGGCAGGCTATGAGGGCGACAGCTGGAAAATCGGT
AAGGCGGGATTTGTGGCGGACAGCCTGGTGAGTCCCCTGTCTGCTGGCTTGCTGGCACAGATCGATGAGGCGGAAAGCAC
TGGGAAAACCCTGGTCTATGTCAGCCAAAATGATGTGCTGGTGGCGATCTTCATGGTGGAAGATAGTTTGAAACCTGAGA
GCAAGCAGCTGATTGCCCAGTTGAAAGAAATGGGCGTGACGCCAATTCTCTTGACGGGTGACCAAGAAAAGACGGCTCGT
TACGTGGCGAGTCAGGTCGGTATTGACCGTGTGATTGCCAACTGTCTGCCGACGGATAAGGCTGCTGTTATCCAAGAATT
ACAAACCGAGTTTGCGTCTGTCGGCATGGTCGGAGACGGCATCAACGACGCTCCCGCCCTGGCTCAAGCCAATGTCAGCT
ATGCTATGGGAAGCGGAACGGACATCGCTATGGAGTCAGCTGACATCGTACTCATGGAAGACCTGACGAGAATTCCTTAC
TCCATTCGTCTCTCTAAGAAAATGCGGGGCATCATCAAGCAGAACATCATCTTTGCGCTATCTGTCATTGCCCTTCTTAT
CATCTCCAACCTCTTCCAGTCTATCAACCTCCCACTCGGTGTGGTGGGCCACGAAGGATCAACGATTTTGGTGATTTTGA
ATGGGTTGAGACTATTGTATTTTAAATAG

Protein sequence :
MTLVTNLKQHSHIITTALCLALILIGILLFQTGQGWAPILFISAFVIGGYQSAKEGISELIFDKHLSVDLLMILAAIGSG
LIGYWMEGALLIFIFSLSSTLEELAMKKSKNAIAALMNMTPPTARKIEENGDITVLDTAAIRIGDLLQVRKGDTVPLDAT
LISPQSIFDESMITGEPLPAEKMAGDAVIGGTINQGPTVTVQVTAEKGDALFDKIVQMVENAQESKSKTATFIENMEDTY
VKVVLVVVPLFILLAHFALGWDWLTAFYRGMILLTIASPCALVASSSPATLSAISRAARKGMIIKGGDIADNIANLEAIV
FDKTGTLTIGKPEVVGATYLGDEELIKQVVQAVEKQSSHPIAQALMTYTADSSAIALQSLEDVTGKGLVAGYEGDSWKIG
KAGFVADSLVSPLSAGLLAQIDEAESTGKTLVYVSQNDVLVAIFMVEDSLKPESKQLIAQLKEMGVTPILLTGDQEKTAR
YVASQVGIDRVIANCLPTDKAAVIQELQTEFASVGMVGDGINDAPALAQANVSYAMGSGTDIAMESADIVLMEDLTRIPY
SIRLSKKMRGIIKQNIIFALSVIALLIISNLFQSINLPLGVVGHEGSTILVILNGLRLLYFK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cadA YP_005732869.1 cadmium-translocating P-type ATPase Not tested Type-V SCCmec Protein 2e-90 42
SE0062 NP_763617.1 copper-transporting ATPase copA Not tested SCCpbp4 Protein 2e-90 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SSUSC84_0277 YP_003024329.1 cation-transporting ATPase BAC0092 Protein 1e-99 42