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Name : GM21_0608 (GM21_0608) Accession : YP_003020440.1 Strain : Geobacter sp. M21 Genome accession: NC_012918 Putative virulence/resistance : Virulence Product : general secretory pathway protein E Function : - COG functional category : N : Cell motility COG ID : COG2804 EC number : - Position : 737478 - 739040 bp Length : 1563 bp Strand : - Note : KEGG: gbm:Gbem_0594 general secretory pathway protein E; TIGRFAM: general secretory pathway protein E; PFAM: type II secretion system protein E; general secretory system protein E; SMART: AAA ATPase DNA sequence : ATGGCAGAAAGCTTAGACATAGAAGAGATAGCGACACGGCTCGGCCTTCCCTACCAGGCCGAGATCGACGACTCCAAGGT AGACGGGGCGCTGGTGAACCGGGTCCCGCTCAACTTCGCCCGCAACAACCTCCTGCTCCCGCTGCACGAGGAGGACGGCT CCATCGTCGCCGCCAGCGCCGACCCGACGAACCTCCTGGCGCTGGACGAGATGGCCGGACTCTTCTCGCAACCGGTCTCC GTGGTCGCGGTCCCGCGCCCGGCTCTCCTGGACGCGGTGAACCGCCTCTACTCCCGCCTCTCCGGTTCCGCCCAGGAGGT GGTCGAGGAACTCGAAGGGGAAGAGCTCTCAACACTCGCCACCACCTTCAACGAGCCGCGCGACCTTATGGAGCTGACCG ACGAGGCGCCGGTGATCCGGCTCTTGAACTCCATCCTGTTTCAGGCCGTGAAGGAGCGCGCGAGCGACATCCACATCGAG CCGTTCGAGCGCGAGCTCGAGGTCCGCTTCCGGATCGACGGCCTTTTGTACAAGATGCTCTCCCCCCCCAAGGTGATCCA GGAGGCGCTCACCTCCCGCGTCAAGATCATGTCCGGGCTCAACATCGCCGAGAAGAGGCTGCCGCAGGACGGGCGCATCA GGGTCAAGGTGGCCGGACGCGACGTCGACATCCGCGTGTCGCTCATCCCCACCTTCTTCGGGGAGCGCGTGGTATTGAGG CTTTTGGACAAGCAGCGCGGCGTCCTCTCCCTCAAAGAGATCGGGCTCTCCGACGGCAACGACCGGCTGATGGACCGGCT TTTGTCGAGGACGAGCGGCATCATCCTGGTCACGGGACCTACCGGCAGCGGCAAGACCACCACGCTCTACGCGGCACTTT CCCAGATCAACTCGCCGGAGAAGAACATCATCACCGTCGAGGACCCGATCGAGTACCAGTTGAAGGGTGTGGGGCAGATA CAGGTCAACCCGAAGATCGACCTCACCTTCGCCGCGGGGCTTCGCTCCATCCTGAGGCAGGACCCGGACATCGTCATGAT CGGTGAGATCCGCGACGCCGAGACCGCCGAGATCGCCATGCAGGCCTCGCTCACCGGTCACCTGGTCCTCTCGACGCTGC ACACAAACGACGCCGCCACCGCGGTCACCCGCCTGATCGACATGGGGATCGAGCCGTTCATGGTCGCCTCTTCGCTCTCC GCGGTACTAGCACAGCGGCTGGTCCGCGTCATCTGCCCGCACTGCAAGGAATCCTACGTCCCGGACCGCAGCTACCCCGG CGTCGAACTCCCGCCGCTTCTGTATCGGGGCCGCGGCTGCGAGAAGTGCTTCAACCTGGGGACCATCGGGCGGGTCGGCA TCTACGAGCTTCTTCCCATCGACGCAGAACTCTGCTCCATGATCATCCGACAGGCCTCCTCCGGCGCCATCAAGGAGTAC GCCGTCTCCAAAGGGATGCGCACCCTGCGCGAGGACGGCCTCGCCAAGGCGGCCCAGGGGATCACCACCATCGAGGAGGT CCTGAGGGTAACCCAGGACGATTATGCCGACCTTTCGCTATAG Protein sequence : MAESLDIEEIATRLGLPYQAEIDDSKVDGALVNRVPLNFARNNLLLPLHEEDGSIVAASADPTNLLALDEMAGLFSQPVS VVAVPRPALLDAVNRLYSRLSGSAQEVVEELEGEELSTLATTFNEPRDLMELTDEAPVIRLLNSILFQAVKERASDIHIE PFERELEVRFRIDGLLYKMLSPPKVIQEALTSRVKIMSGLNIAEKRLPQDGRIRVKVAGRDVDIRVSLIPTFFGERVVLR LLDKQRGVLSLKEIGLSDGNDRLMDRLLSRTSGIILVTGPTGSGKTTTLYAALSQINSPEKNIITVEDPIEYQLKGVGQI QVNPKIDLTFAAGLRSILRQDPDIVMIGEIRDAETAEIAMQASLTGHLVLSTLHTNDAATAVTRLIDMGIEPFMVASSLS AVLAQRLVRVICPHCKESYVPDRSYPGVELPPLLYRGRGCEKCFNLGTIGRVGIYELLPIDAELCSMIIRQASSGAIKEY AVSKGMRTLREDGLAKAAQGITTIEEVLRVTQDDYADLSL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspE | YP_854406.1 | type II secretion protein GspE | Not tested | PAI I APEC-O1 | Protein | 1e-98 | 53 |
| gspE | CAE85233.1 | GspE, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 1e-98 | 53 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| GM21_0608 | YP_003020440.1 | general secretory pathway protein E | VFG0182 | Protein | 2e-109 | 58 |
| GM21_0608 | YP_003020440.1 | general secretory pathway protein E | VFG2048 | Protein | 6e-99 | 53 |
| GM21_0608 | YP_003020440.1 | general secretory pathway protein E | VFG1876 | Protein | 1e-94 | 45 |
| GM21_0608 | YP_003020440.1 | general secretory pathway protein E | VFG0233 | Protein | 1e-80 | 45 |
| GM21_0608 | YP_003020440.1 | general secretory pathway protein E | VFG2426 | Protein | 2e-76 | 43 |
