Gene Information

Name : GM21_0456 (GM21_0456)
Accession : YP_003020294.1
Strain : Geobacter sp. M21
Genome accession: NC_012918
Putative virulence/resistance : Resistance
Product : ABC transporter
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 553519 - 554208 bp
Length : 690 bp
Strand : -
Note : PFAM: ABC transporter; SMART: ATPase AAA; KEGG: gbm:Gbem_0437 ABC transporter

DNA sequence :
ATGCTGCAGCTTCGTGATGTGGTGAAATCCTACAACGGCAAATCCATGGTGACCGCGCTTGCCGGGATCACCCTTTCCAT
CGCCCCCGGCGAGATGGTCGCCATCATGGGCCCCTCCGGCTCGGGCAAATCCACCCTATTGAACCTGATGGGGGGGCTCG
ACGTCCCGACCTCCGGGCAACTGCTGGTCGCCGGGAAGGATCTCGCCCGGGAAAGCGAGAAAGCCCGCTCGCTCTTTCGC
CGCAACAGCGTCTCCTACATCTTCCAGGCCTATCACCTGATGCCGACGCTCAGGGTGCGGCAGAACGTGGCGCTCCCGCT
ACGGTTGGCCGGCGTCTCCGCGAAGAAGGCTGCCCTGCAGGTGGAGCGGGTCCTCGCGGAGGTTGGACTGGAAAAGCGCG
GAGACCATCTCCCGGACGAACTCTCGGGGGGTGAGAGGCAGCGCGTCGCCATCGCGCGCGCCCTGGTGACCGGCGCTCCC
CTGCTCCTCGCGGACGAGCCGACCGGCAACCTCGACAGCGCCCGCGGCAAGGAGATCCTCGCTTTGCTCCGCTCCATCCA
CGCCAAGCGGAACACCACCATCGTCATGGTCACCCATGACCACGACGCCGCCTCCGCCTGCGACCGCCTGATCAGGCTGC
GCGACGGGAGGGTGGAGGACGACGGCGTCGTCATCGGAGGTGGGAGATGA

Protein sequence :
MLQLRDVVKSYNGKSMVTALAGITLSIAPGEMVAIMGPSGSGKSTLLNLMGGLDVPTSGQLLVAGKDLARESEKARSLFR
RNSVSYIFQAYHLMPTLRVRQNVALPLRLAGVSAKKAALQVERVLAEVGLEKRGDHLPDELSGGERQRVAIARALVTGAP
LLLADEPTGNLDSARGKEILALLRSIHAKRNTTIVMVTHDHDAASACDRLIRLRDGRVEDDGVVIGGGR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 7e-33 44
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-34 44
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 2e-34 44
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-34 44
cur_1502 YP_001800896.1 cell division ATP-binding protein FtsE Not tested Not named Protein 8e-30 43
unnamed ABA47263.1 ABC transporter Not tested S-PAI Protein 2e-21 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
GM21_0456 YP_003020294.1 ABC transporter CP001581.1.gene598.p Protein 1e-46 47
GM21_0456 YP_003020294.1 ABC transporter NC_008702.1.4606598. Protein 1e-37 47
GM21_0456 YP_003020294.1 ABC transporter NC_012469.1.7686878. Protein 1e-42 46
GM21_0456 YP_003020294.1 ABC transporter CP001581.1.gene798.p Protein 8e-45 45