Gene Information

Name : GM21_3726 (GM21_3726)
Accession : YP_003023503.1
Strain : Geobacter sp. M21
Genome accession: NC_012918
Putative virulence/resistance : Virulence
Product : ABC transporter
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1121
EC number : -
Position : 4294312 - 4295079 bp
Length : 768 bp
Strand : -
Note : PFAM: ABC transporter; SMART: ATPase AAA; KEGG: gbm:Gbem_3622 ABC transporter

DNA sequence : 
ATGAACAACGGTAAAGGGACTCCCGCCATCGAGGTGCGCCACCTGACCGTCTCCTACGGCGCGCGCCCAGCGCTTCTCGA
CGTATCGGTCAGGATCGAGAAGGACCAACTGGTGGGGGTGATCGGCCCCAACGGGTCGGGGAAATCCACGCTGATCAAGG
CCATCCTCGGCTTCGAGAAGCCGGACGTGGGGGAGATCCTCATCGGCGGGGAGGACGTGCAGAAGGCCAAGGGTAAGGTG
GCCTACGTCCCGCAGCGCGGCGCCGTGGACTGGGACTTCCCCATCACCGTGCGGGAGGTGGCGCTTATGGGGCGCTACCA
GCACGTCCCCTGGTACCGCTCCCCTTCCGCGGCGGACCGGGAGGCGGCACTGGAGGCGCTCTCCATGGTGCGGATGTCCG
AGTTCGCCGAGCGCCAGATCGGGCAGCTCTCCGGTGGGCAGCAGCAGCGGGTGTTCCTGGCGCGGGCGCTGGCACAGGGC
TCCGACATCCTCCTTTTGGACGAGCCTTTCGCCGGGGTGGACGCCGCCACCGAGCGGGCCATACTCGACGTCCTGGAGCG
GGCCAAGGCGGCCGGGAAGACCCTGGTCGTGGTGCATCACGATCTCGCCACCGCGGCCGAGTACTTCGACAACCTGGTCC
TCTTGAAACAGCGGCTCTATGCCTTCGGCCCTCCCGCCGCGGTGCTGCAGGAGGAACTCCTGAGCCAGGTCTACGAGGGG
CGCCTCAGGGTCTTCACCGACCTATTGGCCAAGGAGGGGGGACGATGA

Protein sequence : 
MNNGKGTPAIEVRHLTVSYGARPALLDVSVRIEKDQLVGVIGPNGSGKSTLIKAILGFEKPDVGEILIGGEDVQKAKGKV
AYVPQRGAVDWDFPITVREVALMGRYQHVPWYRSPSAADREAALEALSMVRMSEFAERQIGQLSGGQQQRVFLARALAQG
SDILLLDEPFAGVDAATERAILDVLERAKAAGKTLVVVHHDLATAAEYFDNLVLLKQRLYAFGPPAAVLQEELLSQVYEG
RLRVFTDLLAKEGGR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
EF0575 NP_814340.1 cationic ABC transporter ATP-binding protein Not tested Not named Protein 3e-47 45
ef0093 AAM75296.1 EF0093 Not tested Not named Protein 2e-47 45
sitB NP_461783.1 ATP-binding protein Virulence SPI-1 Protein 1e-46 44
sitB AAD41066.1 SitB Virulence centisome 63 pathogenicity island Protein 8e-47 44
sitB YP_217782.1 iron transporter: fur regulated Virulence SPI-1 Protein 3e-46 44
sitB NP_457256.1 Iron transport protein, ATP-binding component Virulence SPI-1 Protein 3e-45 43
sitB NP_806465.1 iron ABC transporter ATP-binding protein Virulence SPI-1 Protein 3e-45 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
GM21_3726 YP_003023503.1 ABC transporter BAC0400 Protein 4e-52 52
GM21_3726 YP_003023503.1 ABC transporter BAC0350 Protein 5e-47 44

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
GM21_3726 YP_003023503.1 ABC transporter VFG0526 Protein 5e-47 44