Gene Information

Name : GM21_3531 (GM21_3531)
Accession : YP_003023310.1
Strain : Geobacter sp. M21
Genome accession: NC_012918
Putative virulence/resistance : Virulence
Product : transcriptional regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 4076454 - 4077125 bp
Length : 672 bp
Strand : -
Note : PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; KEGG: gbm:Gbem_3465 transcriptional regulator

DNA sequence : 
ATGTACTTTTTGATCGTCGAAGACGCGGAAAAAACCGCTGAACAGTTGCGCAGGGGCCTGTCGGAGATGTCGGTGACGGT
GGACGTTGCCCCGGACGGGCTGAAGGGGCTGGCGATGGCCCGGGAGAGGGACTACGACCTGATCGTCCTCGACCTCATGC
TCCCCGGCATCGACGGCTTCGAGGTGGTGAAGCGGTTGCGCGAAGGGGGCTCCACCACTCCGATCATGATCCTCACCGCG
CGCGACGAGGTGCACGACCGCATCACCGGGTTGCAGCTTGGCGCCGACGATTACCTGGTGAAGCCTTACTCTTTCGCCGA
GCTCTGTGCCCGCATCCAGGCGTTGTTACGCCGGGGACAGGTGGTGCAGCAGGACGAGATACAGGTGGCCGACCTTACCG
TCAACTTCTTTGCCCACAAGGCGACCCGCGCCGGCAAGAACCTGGACCTCACCCCGAAGGAGTTCGCCCTGCTCTCCCTG
TTGATCCGTCGGGCGGGAGAGGTGCAAAGCCGGTTGAGGATCGCCGAGCGGGTCTGGAACTTAGGCTTCGAGGCCAACCT
GAAGATCGTGGACGTCAAGGTGGCCGCCCTGAGGGCCAAGGTGGACGGGCCTTTCGAGAAGAAGCTGATACACACGGTGC
GCGGCTTGGGGTACATACTTGAAGATCGGTAA

Protein sequence : 
MYFLIVEDAEKTAEQLRRGLSEMSVTVDVAPDGLKGLAMARERDYDLIVLDLMLPGIDGFEVVKRLREGGSTTPIMILTA
RDEVHDRITGLQLGADDYLVKPYSFAELCARIQALLRRGQVVQQDEIQVADLTVNFFAHKATRAGKNLDLTPKEFALLSL
LIRRAGEVQSRLRIAERVWNLGFEANLKIVDVKVAALRAKVDGPFEKKLIHTVRGLGYILEDR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 2e-46 50
copR AAC33719.1 regulatory protein CopR Not tested SPI-5 Protein 1e-45 49

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
GM21_3531 YP_003023310.1 transcriptional regulator BAC0197 Protein 3e-53 52
GM21_3531 YP_003023310.1 transcriptional regulator BAC0125 Protein 5e-52 51
GM21_3531 YP_003023310.1 transcriptional regulator BAC0083 Protein 3e-53 50
GM21_3531 YP_003023310.1 transcriptional regulator BAC0111 Protein 9e-54 50
GM21_3531 YP_003023310.1 transcriptional regulator BAC0308 Protein 3e-50 48
GM21_3531 YP_003023310.1 transcriptional regulator BAC0347 Protein 1e-47 48
GM21_3531 YP_003023310.1 transcriptional regulator BAC0638 Protein 1e-43 48
GM21_3531 YP_003023310.1 transcriptional regulator NC_003923.1003417.p0 Protein 6e-35 43
GM21_3531 YP_003023310.1 transcriptional regulator NC_013450.8614146.p0 Protein 6e-35 43
GM21_3531 YP_003023310.1 transcriptional regulator NC_002951.3238224.p0 Protein 6e-35 43
GM21_3531 YP_003023310.1 transcriptional regulator NC_007793.3914065.p0 Protein 6e-35 43
GM21_3531 YP_003023310.1 transcriptional regulator NC_002758.1121390.p0 Protein 6e-35 43
GM21_3531 YP_003023310.1 transcriptional regulator NC_010079.5776364.p0 Protein 6e-35 43
GM21_3531 YP_003023310.1 transcriptional regulator NC_002952.2859858.p0 Protein 6e-35 43
GM21_3531 YP_003023310.1 transcriptional regulator NC_007622.3794948.p0 Protein 6e-35 43
GM21_3531 YP_003023310.1 transcriptional regulator NC_002952.2859905.p0 Protein 4e-34 42
GM21_3531 YP_003023310.1 transcriptional regulator NC_003923.1003749.p0 Protein 6e-34 42
GM21_3531 YP_003023310.1 transcriptional regulator NC_009782.5559369.p0 Protein 6e-34 42
GM21_3531 YP_003023310.1 transcriptional regulator NC_002951.3237708.p0 Protein 6e-34 42
GM21_3531 YP_003023310.1 transcriptional regulator NC_002745.1124361.p0 Protein 6e-34 42
GM21_3531 YP_003023310.1 transcriptional regulator NC_009641.5332272.p0 Protein 6e-34 42
GM21_3531 YP_003023310.1 transcriptional regulator NC_013450.8614421.p0 Protein 6e-34 42
GM21_3531 YP_003023310.1 transcriptional regulator NC_007793.3914279.p0 Protein 6e-34 42
GM21_3531 YP_003023310.1 transcriptional regulator NC_002758.1121668.p0 Protein 6e-34 42
GM21_3531 YP_003023310.1 transcriptional regulator NC_007622.3794472.p0 Protein 4e-34 42
GM21_3531 YP_003023310.1 transcriptional regulator AE015929.1.gene1106. Protein 2e-29 41
GM21_3531 YP_003023310.1 transcriptional regulator HE999704.1.gene1528. Protein 3e-24 41
GM21_3531 YP_003023310.1 transcriptional regulator AE000516.2.gene3505. Protein 5e-27 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
GM21_3531 YP_003023310.1 transcriptional regulator VFG0596 Protein 8e-47 50
GM21_3531 YP_003023310.1 transcriptional regulator VFG0473 Protein 5e-31 48
GM21_3531 YP_003023310.1 transcriptional regulator VFG1390 Protein 3e-38 43
GM21_3531 YP_003023310.1 transcriptional regulator VFG1389 Protein 1e-32 42