Gene Information

Name : GM21_3529 (GM21_3529)
Accession : YP_003023308.1
Strain : Geobacter sp. M21
Genome accession: NC_012918
Putative virulence/resistance : Unknown
Product : thiamine biosynthesis protein ThiC
Function : -
COG functional category : H : Coenzyme transport and metabolism
COG ID : COG0422
EC number : -
Position : 4073421 - 4074734 bp
Length : 1314 bp
Strand : +
Note : required for the synthesis of the hydromethylpyrimidine moiety of thiamine

DNA sequence :
ATGACTCAGCTCGAATACGCCCGCAAGGGGATCATTACCGACAAGATGAAGACCGCGGCCCTCGCCGAAGGGGTGGATGC
GGAATTCATCCGCGCCGGGATCGCCGCGGGGAACATCATCATCTGCCACAACAACAAGCACGTGAACGGCACCCCGCTCG
CAGTGGGCAAGGGACTCAGAACCAAGGTGAACGCCAACATCGGCTCCTCCGCCGACGACCTCAATTTCGAGAACGAGCTG
GAGAAGGTGCGCGTGGCGGTTGCCAGCGGCGCCGACGCCATCATGGACCTCTCGACCGGGGGACCGGTGGACGAGATCCG
CCGCGCCGTGATCGCCGAGACCTCCGCCTGCATCGGCACCGTGCCGCTGTACCAGGCGGCACTCGACGCGGTCAGAAAGC
ATAAGAAGGCGATCGTGGAGATGACGGTCGAGGATATCTTCCAAGGGGTGATCAAGCACGCCGAGGACGGCGTCGACTTC
ATCACCGTGCACTGCGGCGTGACCCGCTCGACGGTCGAGCGCATGCGCCGCGAAGGGCGCATCATGGACGTGGTCTCCCG
CGGCGGCGCCTTCACCATCGAGTGGATGGCGCACAACAACGCGGAGAACCCGCTTTACGAGCACTTCGACCGCCTGCTGG
ATATCGTCAAGGCCTACGACATGACCCTGTCGCTGGGAGACGGCTTCCGCCCCGGCTGCCTGGCCGACGCGACCGACCGC
GCCCAGATCCACGAACTGATTCTTTTGGGCGAACTCACCCAGCGCGCGCAGGAGTACGGCGTGCAGGTGATGATCGAGGG
GCCGGGGCACATGCCGCTGAACCAGATCGAGGCCAACATCCTCTTGCAGAAGAGGCTCTGCCACGGCGCTCCCTTCTACG
TGCTCGGGCCGCTGGTCACCGACATCGCGCCGGGCTACGACCACATCACCTCGGCCATCGGCGGCACCATAGCCGCGGCC
GCTGGAGCCGACTTCCTCTGCTACGTGACCCCTTCGGAGCACCTGAAGCTCCCGAGCGTCGAGGACGTTCGCGAGGGTGT
CATGGCGAGCCGGATCGCGGCGCACGCAGCCGACATCGTCAAAGGGGTCAAGGGGGCCATGGAGAAGGACAACGAGATGG
CCCGCTGCCGCAAGAAGCTGGATTGGGAGGGGCAGTTCGCTCTCGCCATCGACCCGGTGAAGGCGCGCCGCCTGAGGGAG
GAGTCGGGGGTCGCCGACCACGGCGCCTGCACCATGTGCGGCGAGTTCTGCGCCTACAAGGTGATGGACGACGCCACCGA
GCGCGAAAAGGCCAACGCGGCCAACGCCGCCTGA

Protein sequence :
MTQLEYARKGIITDKMKTAALAEGVDAEFIRAGIAAGNIIICHNNKHVNGTPLAVGKGLRTKVNANIGSSADDLNFENEL
EKVRVAVASGADAIMDLSTGGPVDEIRRAVIAETSACIGTVPLYQAALDAVRKHKKAIVEMTVEDIFQGVIKHAEDGVDF
ITVHCGVTRSTVERMRREGRIMDVVSRGGAFTIEWMAHNNAENPLYEHFDRLLDIVKAYDMTLSLGDGFRPGCLADATDR
AQIHELILLGELTQRAQEYGVQVMIEGPGHMPLNQIEANILLQKRLCHGAPFYVLGPLVTDIAPGYDHITSAIGGTIAAA
AGADFLCYVTPSEHLKLPSVEDVREGVMASRIAAHAADIVKGVKGAMEKDNEMARCRKKLDWEGQFALAIDPVKARRLRE
ESGVADHGACTMCGEFCAYKVMDDATEREKANAANAA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB0868_00321 YP_008211647.1 Thiamine biosynthesis protein ThiC Not tested AbaR26 Protein 6e-73 44
BJAB07104_00317 YP_008207782.1 Thiamine biosynthesis protein ThiC Not tested AbaR25 Protein 6e-73 44