Gene Information

Name : GM21_3122 (GM21_3122)
Accession : YP_003022908.1
Strain : Geobacter sp. M21
Genome accession: NC_012918
Putative virulence/resistance : Virulence
Product : transcriptional regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 3624377 - 3625084 bp
Length : 708 bp
Strand : -
Note : PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; KEGG: gbm:Gbem_1172 transcriptional regulator

DNA sequence : 
ATGAAAGAGAGCCAAGAGCCGACCGGGCAGCGCATACTCGTCATCGACGACGAGGCGGCGATCCGCCGCTTCCTGCATTC
CGCGTTGTCCTCGGAGGAGTTCACCCTCCACGAGGCCGATTCCGGTCACGGCGGACTGTCCGCCGCCGCGGCCCTGAGGC
CCGACCTGATCCTCCTGGATCTGGGGCTTCCAGACCTGGAGGGGATCGAGGTGATCCGCCGCATCCGCGAGTGGTCCCAG
GTCCCCATCATCGTCCTCTCCGTGCGCGAGCGCGAGGACGACAAGGTGGCGGCTCTCGACGCCGGGGCCGACGACTACCT
CACCAAGCCGTTCGGGGTGGGGGAACTGCTGGCCCGCATGAGGGCCTCCCTGCGCCGTTCCGCGGTGCAGCTCTCCGAGC
CGGTCTTCTCAAGCGGCGACCTCACGGTGGATTTGAACCTGCGCCGGGTGACGGTGGAGGGGGGCGAGGTCCAGCTGACG
CCCACCGAGTACGACCTTTTGCGCCTGCTCATCACCCACGCGGACAAGGTCATTACCCACAGCCAGATCCTGAAGCAGAT
CTGGGGGGTGGCCTACCAGGAGCAGCCCCAGGTGCTCAGGGTCACCATCAGCAACCTGAGGAAGAAGATCGAGCGCGACC
CCTCGCGCCCCAGGCACATCACCACCGAGCCGGGAGTAGGCTACCGGTTGAAGCAGGCGCAACCATGA

Protein sequence : 
MKESQEPTGQRILVIDDEAAIRRFLHSALSSEEFTLHEADSGHGGLSAAAALRPDLILLDLGLPDLEGIEVIRRIREWSQ
VPIIVLSVREREDDKVAALDAGADDYLTKPFGVGELLARMRASLRRSAVQLSEPVFSSGDLTVDLNLRRVTVEGGEVQLT
PTEYDLLRLLITHADKVITHSQILKQIWGVAYQEQPQVLRVTISNLRKKIERDPSRPRHITTEPGVGYRLKQAQP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
EF0571 NP_814337.1 DNA-binding response regulator Not tested Not named Protein 1e-29 43
ef0091 AAM75294.1 EF0091 Not tested Not named Protein 7e-30 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
GM21_3122 YP_003022908.1 transcriptional regulator NC_013450.8614146.p0 Protein 8e-24 42
GM21_3122 YP_003022908.1 transcriptional regulator NC_002951.3238224.p0 Protein 8e-24 42
GM21_3122 YP_003022908.1 transcriptional regulator NC_007793.3914065.p0 Protein 8e-24 42
GM21_3122 YP_003022908.1 transcriptional regulator NC_002758.1121390.p0 Protein 8e-24 42
GM21_3122 YP_003022908.1 transcriptional regulator NC_010079.5776364.p0 Protein 8e-24 42
GM21_3122 YP_003022908.1 transcriptional regulator NC_002952.2859858.p0 Protein 8e-24 42
GM21_3122 YP_003022908.1 transcriptional regulator NC_007622.3794948.p0 Protein 8e-24 42
GM21_3122 YP_003022908.1 transcriptional regulator NC_003923.1003417.p0 Protein 8e-24 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
GM21_3122 YP_003022908.1 transcriptional regulator VFG1390 Protein 3e-24 42