Gene Information

Name : GM21_3093 (GM21_3093)
Accession : YP_003022879.1
Strain : Geobacter sp. M21
Genome accession: NC_012918
Putative virulence/resistance : Virulence
Product : pyruvate kinase
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG0469
EC number : 2.7.1.40
Position : 3582536 - 3583981 bp
Length : 1446 bp
Strand : -
Note : KEGG: gbm:Gbem_1182 pyruvate kinase; TIGRFAM: pyruvate kinase; PFAM: pyruvate kinase barrel; pyruvate kinase alpha/beta

DNA sequence :
ATGTTCCGTCACACAAAGATCGTTGCCACCGTCGGACCCGCCAGCGAATCAGAAGAGATGCTCGGCGCCTTGATAAAGGC
CGGCGTCGACGTTTTCCGCCTCAACTTCTCCCACGGCGACCATGCCGCCAAATCCGCCGTCATCCGCAGCATCCGCAAAC
TCTCCGACCAGCATGAGCATTCAGTCGCCATTTTAGGGGACCTGCAGGGGCCCAAGATCCGCACCGGTCTCATGAAAGGG
GGCGGGATGCCGCTCACCTCCGGAACCGAAGTGATCGTCACCACCCGGGAACTGCTGGGCGAGGGGAACCTCATTCCCAC
CATCTACCAGGGGCTCCCCGGGGACGTGAGGCCCGACGACCGCATCCTTTTGGACGACGGCCTGATGGAGCTGAAGGTGC
TGGGGGTGGAGGGGGACGACGTGCGCTGCCTCGTCGTGACCGGAGGCCTCCTCAAGGACCGCAAGGGGATCAACCTCCCC
GGCGCCAAGGTTTCCGCCCCCGCCATGACCGACAAGGACCGTGACGACCTCGAGTTCTGCATGGAGCAGCGCCTCGACTT
CGTCGCGCTTTCCTTCGTGCGCGAGGCCTCCGACGTGCAGGAATTGAGGAGCATCATCGACAGCCGCGGCTCCCGGCTTC
GCATCATCTCGAAGATCGAGAAGCCGGAGGCTGTGATCAACTTCGGCGCCATCTTGCGCGTCTCCGACGGGGTCATGGTG
GCGCGCGGCGACCTGGGGGTGGAGTTGAACCCCGAGAAGGTCCCGCTGATCCAGAAACGGATCATCCGCGATTGCAACGA
CGCCGGCAAGCCGGTGATCACCGCCACCCAGATGCTGGAGAGCATGGTGAACAACCCGCGCCCGACCCGCGCCGAGACCT
CCGACGTCGCCAACGCCATCCTCGACGGCACCGACGCCATCATGCTTTCCGCCGAGACGGCGTCCGGCAAGTACCCCATC
GAGGCGGTCTCCATGATGGTGCAGGTGGCGCGCGACGTGGAAGCGGACCCGCAGCTCATGTCGCAAAGCTGCCACATCGC
CCAGACCGAGGCGGAGCCGAACCTCTCCGAGGTGATCGGGCTTGCCGCCTGCCGGGCGGCGGAGAGCGTCAAGGCGTCGG
CGATACTTGCCTTCACCCAGACCGGAGGGACCGCGGCTTTGGTTTCCAAATGCCGCCCGGCCCAGCCCATCATCGCCGTG
ACGCCCTCCGAAGAGGTGCGGCGCGTGCTCGCCCTCTACGCCGGGGTTCATTCGCTGCGCGTGGATATCGAGGGGGACAC
CGAGTCCCAGATCATCTCGGTCGAGAAGGCGGTGCTGGAAACCGGCTGGCTCAAGAAGGGGGACCTTGTGGTGATAACCA
TGGGAAGTCCGCTTTCCTCGGCGGGAACCACCAACCTGATGAAGGTGCACCGGCTGGGGGAGCCTGAGGTCAAGCGGCGA
CTTTGA

Protein sequence :
MFRHTKIVATVGPASESEEMLGALIKAGVDVFRLNFSHGDHAAKSAVIRSIRKLSDQHEHSVAILGDLQGPKIRTGLMKG
GGMPLTSGTEVIVTTRELLGEGNLIPTIYQGLPGDVRPDDRILLDDGLMELKVLGVEGDDVRCLVVTGGLLKDRKGINLP
GAKVSAPAMTDKDRDDLEFCMEQRLDFVALSFVREASDVQELRSIIDSRGSRLRIISKIEKPEAVINFGAILRVSDGVMV
ARGDLGVELNPEKVPLIQKRIIRDCNDAGKPVITATQMLESMVNNPRPTRAETSDVANAILDGTDAIMLSAETASGKYPI
EAVSMMVQVARDVEADPQLMSQSCHIAQTEAEPNLSEVIGLAACRAAESVKASAILAFTQTGGTAALVSKCRPAQPIIAV
TPSEEVRRVLALYAGVHSLRVDIEGDTESQIISVEKAVLETGWLKKGDLVVITMGSPLSSAGTTNLMKVHRLGEPEVKRR
L

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY1744 NP_456147.1 pyruvate kinase Not tested SPI-2 Protein 4e-79 45
pykF YP_216386.1 pyruvate kinase Not tested SPI-2 Protein 2e-78 44
pykF NP_805051.1 pyruvate kinase Not tested SPI-2 Protein 2e-78 44
pykF CAA68205.1 pyruvate kinase like protein Not tested SPI-2 Protein 9e-78 44
pykA NP_273151.1 pyruvate kinase Not tested IHT-A Protein 5e-64 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
GM21_3093 YP_003022879.1 pyruvate kinase VFG0479 Protein 1e-78 44