Gene Information

Name : rph (GM21_3070)
Accession : YP_003022856.1
Strain : Geobacter sp. M21
Genome accession: NC_012918
Putative virulence/resistance : Unknown
Product : ribonuclease PH
Function : -
COG functional category : J : Translation, ribosomal structure and biogenesis
COG ID : COG0689
EC number : 2.7.7.56
Position : 3559231 - 3559950 bp
Length : 720 bp
Strand : -
Note : RNase PH; tRNA nucleotidyltransferase; forms hexamers in Bacillus subtilis; phosphoroltic 3'-5' exoribonuclease; involved in maturation of tRNA precursors and removes terminal nucleotides near CCA acceptor arms of mature tRNAs

DNA sequence :
ATGATACGCAGAGAAGGCCGCGCGGCCAACGCCTTGAGAGAAGTTAAGATCACCCGCAACTACCTGAAGCACGCCGAGGG
CTCTGTCCTGGTCGAGTTTGGGGACACCAAAGTCATCTGCAACGCAACGGTCGAGGCGAGGGTGCCTTCGTTTCTGAAAG
GGAAGGGGAGCGGCTGGGTCACGGCGGAGTACTGCATGCTGCCGCGCGCCACGCACACCAGGAACCAGCGCGAATCGGCC
AAGGGGAAACTCTCCGGCCGCACTCACGAGATCCAGAGGCTTATCGGCAGGTCGCTGCGTGCGGTGGTCGACCTGGAGCT
TTTGGGCGAGCGCTCCATCGTCATCGACTGCGACGTGATCCAAGCCGACGGCGGCACCCGTACCGCCTCCATTACCGGCG
CCTACGTCGCCCTGGCGGACGCCCTGCAGAACCTGGTCAAGGCCGGCGACCTCGAGAAGAGCCCTCTGAGGGAGGCGGTT
GCCGCGGTGAGCGTCGGTATCGTCGACGGCGTTCCCTTCCTCGATCTCGACTACCCCGAGGACTCAACTGCCGAAGTCGA
CATGAACTTCGTGATGACCTCGTCCATGCGCTTTGTCGAGGTGCAGGGAACCGCCGAGGCGGAGCCTTTCACCCTCGACC
AGATGGACGCCATGAGAAGCCACGCTATGCTCGGTCTCTCCCGCCTCTTCGAGATCCAGCAGGAGGCCCTGCAGGCATGA

Protein sequence :
MIRREGRAANALREVKITRNYLKHAEGSVLVEFGDTKVICNATVEARVPSFLKGKGSGWVTAEYCMLPRATHTRNQRESA
KGKLSGRTHEIQRLIGRSLRAVVDLELLGERSIVIDCDVIQADGGTRTASITGAYVALADALQNLVKAGDLEKSPLREAV
AAVSVGIVDGVPFLDLDYPEDSTAEVDMNFVMTSSMRFVEVQGTAEAEPFTLDQMDAMRSHAMLGLSRLFEIQQEALQA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
rph YP_001800860.1 ribonuclease PH Not tested Not named Protein 1e-64 60