Gene Information

Name : GM21_2608 (GM21_2608)
Accession : YP_003022404.1
Strain : Geobacter sp. M21
Genome accession: NC_012918
Putative virulence/resistance : Virulence
Product : KpsF/GutQ family protein
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG0794
EC number : 5.3.1.13
Position : 3044239 - 3045207 bp
Length : 969 bp
Strand : -
Note : KEGG: gbm:Gbem_1602 KpsF/GutQ family protein; TIGRFAM: KpsF/GutQ family protein; PFAM: sugar isomerase (SIS); hypothetical protein

DNA sequence :
TTGATAATAGAAGAAGCGAAGAGGGTGATACGGGTCGAGGCTGAGGCTCTTTTGAACCTAGAGGCGTCCATCAACGGCGC
GTTCGAGCAAGCGGTGCGGATGATCCTGAACAGCGAGACCGGCCGCGTCGTGGTGACCGGCATGGGCAAGTCCGGGCTCA
TCGGCCAGAAGATCGCCTCCACCATGGCGTCGACGGGTACTCCCGCCTTCTTCCTGCATCCGGCGGAAGGGATCCACGGC
GACCTCGGCATGATCATGAAGGGTGACGTGGTGATCGCCATCTCCAACTCAGGCGAGACCGACGAGGTGGTGAAAATCCT
CCCCATCATCAAGCGGCTCGGCGCTTCTCTCATCGCCATGGCCGGCAATCCCGCCTCCACCCTCGCCAAGAGCGGCGACA
TCTTTCTCGACATATCGGTAAAGGAAGAGGCGTGCCCGCTGGGGCTAGCCCCCACGGCATCGACGACCGTCACCCTCGCC
ATGGGGGACGCCATCGCGGTGGCGCTTCTGGTGAGCCGCGGTTTCAAGGCCGAGGACTTCGCCATGTTCCATCCCGGCGG
CGCGCTGGGGCGCAGGCTTCTATTGAGGGTCCAGGACATCATGCATTCCGGCGAGGCGCTCCCCCTGGTCAACGAGAAGA
CCCTGATGCGGGAGGCGCTTTTCACCATCACCTCCAAAGGGCTCGGCATCACCGGCGTCACCTCCGACGACGGCGCCCTC
ATCGGGGTAATCACCGACGGCGACCTGCGGCGCGCGCTCGGCAAGGGGCTTGACATCATCAACCTCCCGGCAGCGGAACT
GATGAAAGCCGGCGCCAAGCGGATTCGCCGCGACGAACTTGCGGCGCGGGCACTGCAGCAGATGGAGCAGTACTCCATCA
CCTCTCTCTTCGTCTTCGACGATGACAAGGCCAAGGCACCGGTTGGGATCGTACATTTGCACGACCTATTGAAGGCCGGC
ATAGCGTAA

Protein sequence :
MIIEEAKRVIRVEAEALLNLEASINGAFEQAVRMILNSETGRVVVTGMGKSGLIGQKIASTMASTGTPAFFLHPAEGIHG
DLGMIMKGDVVIAISNSGETDEVVKILPIIKRLGASLIAMAGNPASTLAKSGDIFLDISVKEEACPLGLAPTASTTVTLA
MGDAIAVALLVSRGFKAEDFAMFHPGGALGRRLLLRVQDIMHSGEALPLVNEKTLMREALFTITSKGLGITGVTSDDGAL
IGVITDGDLRRALGKGLDIINLPAAELMKAGAKRIRRDELAARALQQMEQYSITSLFVFDDDKAKAPVGIVHLHDLLKAG
IA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
kpsF AAZ04466.1 polysialic capsule transport protein Virulence PAI I APEC-O1 Protein 5e-48 42
kpsF YP_854329.1 polysialic acid capsule synthesis protein KpsF Not tested PAI I APEC-O1 Protein 5e-48 42
kpsF CAE85210.1 KpsF protein Virulence PAI V 536 Protein 4e-48 41