Gene Information

Name : GM21_2513 (GM21_2513)
Accession : YP_003022312.1
Strain : Geobacter sp. M21
Genome accession: NC_012918
Putative virulence/resistance : Virulence
Product : transcriptional regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 2940074 - 2940751 bp
Length : 678 bp
Strand : +
Note : PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; KEGG: gbm:Gbem_1846 transcriptional regulator

DNA sequence :
ATGCAGACCGTATTGATCATCGAAGACGAAAAAGACCTCGCCGAACTCATCGCGTTCAATCTGGAAAGAGAAGGGTTCCA
GGCAATAGTGGCAACGGATGGCTTCGACGGGTTGGAGCAGGCAGTAAGAACGCTGCCGGACCTGATTCTGTTGGACCTCA
TGCTCCCGGGCATGCTGGGAACGGAGGTCTGCAAGAACATCAGGAAGTCGGACAGGACCGCGGGGATACCGGTGATCATG
CTCACCGCCAAAGGGGAAGAGATCGACAAAGTGGTCGGCTTCGAGGTGGGAGCCGATGACTACGTGGTGAAACCGTTCTC
AAGCAGGGAGCTGATGCTGCGCATGAAGGCCGTACTGAGGCGATCCAAAACCCGCCCCGCCGCTGCGACGGCGATGCAGG
TAGGCCCCATCGACATAGACGTAGAACGCCACTGCGTCCTGGTCAACGGCGGCGAGATCAACTTCACCGGCACGGAATTC
AAGCTCCTGCACACCCTGGCGCAGAGGCTTGGCAGGGTCCAGAGCAGAGACGTACTGCTGCGGGACGTATGGGGGTACAA
CTTCGTGGACGACAGCCGGACAGTCGACACCCACATAACCCGCCTGCGCACCAAACTGGGGGAAGCGGGGGATCTGATAA
AAACCGTCCGGGGTTTCGGCTACAAACTGGAGGTGTGA

Protein sequence :
MQTVLIIEDEKDLAELIAFNLEREGFQAIVATDGFDGLEQAVRTLPDLILLDLMLPGMLGTEVCKNIRKSDRTAGIPVIM
LTAKGEEIDKVVGFEVGADDYVVKPFSSRELMLRMKAVLRRSKTRPAAATAMQVGPIDIDVERHCVLVNGGEINFTGTEF
KLLHTLAQRLGRVQSRDVLLRDVWGYNFVDDSRTVDTHITRLRTKLGEAGDLIKTVRGFGYKLEV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 3e-23 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
GM21_2513 YP_003022312.1 transcriptional regulator NC_002952.2859905.p0 Protein 2e-39 45
GM21_2513 YP_003022312.1 transcriptional regulator NC_013450.8614421.p0 Protein 2e-39 45
GM21_2513 YP_003022312.1 transcriptional regulator NC_007793.3914279.p0 Protein 2e-39 45
GM21_2513 YP_003022312.1 transcriptional regulator NC_007622.3794472.p0 Protein 2e-39 45
GM21_2513 YP_003022312.1 transcriptional regulator NC_002745.1124361.p0 Protein 2e-39 45
GM21_2513 YP_003022312.1 transcriptional regulator NC_009782.5559369.p0 Protein 2e-39 45
GM21_2513 YP_003022312.1 transcriptional regulator NC_002951.3237708.p0 Protein 2e-39 45
GM21_2513 YP_003022312.1 transcriptional regulator NC_002758.1121668.p0 Protein 2e-39 45
GM21_2513 YP_003022312.1 transcriptional regulator NC_003923.1003749.p0 Protein 2e-39 45
GM21_2513 YP_003022312.1 transcriptional regulator NC_009641.5332272.p0 Protein 2e-39 45
GM21_2513 YP_003022312.1 transcriptional regulator AE000516.2.gene3505. Protein 8e-31 45
GM21_2513 YP_003022312.1 transcriptional regulator BAC0125 Protein 3e-25 44
GM21_2513 YP_003022312.1 transcriptional regulator NC_012469.1.7685629. Protein 1e-36 44
GM21_2513 YP_003022312.1 transcriptional regulator NC_003923.1003417.p0 Protein 4e-31 43
GM21_2513 YP_003022312.1 transcriptional regulator NC_013450.8614146.p0 Protein 4e-31 43
GM21_2513 YP_003022312.1 transcriptional regulator NC_002951.3238224.p0 Protein 4e-31 43
GM21_2513 YP_003022312.1 transcriptional regulator NC_007793.3914065.p0 Protein 4e-31 43
GM21_2513 YP_003022312.1 transcriptional regulator NC_002758.1121390.p0 Protein 4e-31 43
GM21_2513 YP_003022312.1 transcriptional regulator NC_010079.5776364.p0 Protein 4e-31 43
GM21_2513 YP_003022312.1 transcriptional regulator NC_002952.2859858.p0 Protein 4e-31 43
GM21_2513 YP_003022312.1 transcriptional regulator NC_007622.3794948.p0 Protein 4e-31 43
GM21_2513 YP_003022312.1 transcriptional regulator CP001918.1.gene5135. Protein 3e-25 43
GM21_2513 YP_003022312.1 transcriptional regulator AE015929.1.gene1106. Protein 2e-26 42
GM21_2513 YP_003022312.1 transcriptional regulator HE999704.1.gene2815. Protein 8e-37 42
GM21_2513 YP_003022312.1 transcriptional regulator HE999704.1.gene1528. Protein 5e-26 41
GM21_2513 YP_003022312.1 transcriptional regulator AE016830.1.gene1681. Protein 6e-37 41
GM21_2513 YP_003022312.1 transcriptional regulator CP001485.1.gene721.p Protein 3e-24 41
GM21_2513 YP_003022312.1 transcriptional regulator CP001138.1.gene2239. Protein 1e-24 41
GM21_2513 YP_003022312.1 transcriptional regulator BAC0596 Protein 1e-24 41
GM21_2513 YP_003022312.1 transcriptional regulator CP000034.1.gene2186. Protein 2e-25 41
GM21_2513 YP_003022312.1 transcriptional regulator BAC0039 Protein 2e-25 41
GM21_2513 YP_003022312.1 transcriptional regulator CP000647.1.gene2531. Protein 4e-25 41
GM21_2513 YP_003022312.1 transcriptional regulator NC_002695.1.916589.p Protein 2e-25 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
GM21_2513 YP_003022312.1 transcriptional regulator VFG0596 Protein 1e-23 41
GM21_2513 YP_003022312.1 transcriptional regulator VFG1389 Protein 7e-26 41