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Name : GM21_2494 (GM21_2494) Accession : YP_003022294.1 Strain : Geobacter sp. M21 Genome accession: NC_012918 Putative virulence/resistance : Virulence Product : nucleotide sugar dehydrogenase Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG0677 EC number : - Position : 2917252 - 2918538 bp Length : 1287 bp Strand : - Note : TIGRFAM: nucleotide sugar dehydrogenase; PFAM: UDP-glucose/GDP-mannose dehydrogenase; UDP-glucose/GDP-mannose dehydrogenase dimerisation; UDP-glucose/GDP-mannose dehydrogenase; KEGG: gbm:Gbem_1754 nucleotide sugar dehydrogenase DNA sequence : ATGACGCATAATCGTAAAATTTCAGTGGTAGGGCTTGGGTACGTTGGGCTTCCGGTGGCGGTCGCCTTCGGCAGGGTGCA GCGAACCATCGGGTTTGACATCAGTGCGAAGAGGATCGAGGAGTTGCGCTCAGGATGGGACCGTACAGGGGAAGTTTCCT CCGAGGATTTGGTCAGCGCCGACATCTGCTTCACCGACAAGATCGACGAGCTGGCACGGGCGGATTTTCATGTGGTGGCG GTGCCGACACCTGTCGACTCGGCTAACCAGCCGGACCTCTCCCTGCTCTGCAGCGCATCGGAAACGGTGGGGAGGGCGCT CAAAAAGGGTGACATCGTGGTCTACGAGTCCACGGTGTATCCGGGCGTCACAGAGGAGGTCTGCCTCCCCATCCTGGAGT CGGTATCGGGGCTGAAGAGTCTCGATGATTTCACGGTCGGCTACAGCCCGGAGCGGATCAACCCAGGCGACAAGGAGCAC ACCTTCACCAGCATCCTCAAGGTCGTTTCCGGTCAGGACCGGCACACCTTGGAGCAGGTGGACGCTGTGTACTCCTCGGT GGTGAAGCCGGGGGTGCACCGTGCTCCTTCCATCAAGGTAGCCGAGGCCGCCAAGGTCATCGAGAACACCCAGCGCGACC TGAACATCGCCCTCATGAACGAGCTGGCGCTGATTTTCGATCGCTTGGGGATCGATACCAGCGAGGTACTGGCCGCGGCG GGAAGCAAGTGGAACTTCCTGAACTTCAAGCCGGGGCTGGTAGGCGGCCACTGTATCGGCGTCGATCCATACTATCTCAC CTACCAGGCCGAGAAGATCGGGTACATCCCCCAGGTTATCCTGGCGGGGCGGCGCATAAACGACGGCATGGGTAAATTCA TCGCCCAGCGGGCGGTAAAGGAGATCATCAGAGCGGGGCACCACGTGCTTGGCTCGTATGTTACGGTGCTGGGACTGACC TTCAAGGAAAATTGCCCCGACCTGCGCAACTCGAAGGTCGTCGATATCTTGACCGAGCTCAGTGACTATGGATTGAAGGT GCAGGTATGCGACCCGATAGCAGACCCCGCGGAGGCGCAGCAGGCGTACGGGGTAACGCTCAAGGAGCCGGAAAAACTCC ATCCCGCGGTTGCTGTTATCGCCGCGGTCGCCCACGACTCCTACCGCGCCTGGGGGGCCGCAAAGTTCGCGAGCCTTATG GTAGAGAACCCGGTGCTCATAGACGTGAAGGGTATTTACGACAGCCGGGCCATGTCTGCGGCGGGGATCCGGGTCTGGTG CCTGTAG Protein sequence : MTHNRKISVVGLGYVGLPVAVAFGRVQRTIGFDISAKRIEELRSGWDRTGEVSSEDLVSADICFTDKIDELARADFHVVA VPTPVDSANQPDLSLLCSASETVGRALKKGDIVVYESTVYPGVTEEVCLPILESVSGLKSLDDFTVGYSPERINPGDKEH TFTSILKVVSGQDRHTLEQVDAVYSSVVKPGVHRAPSIKVAEAAKVIENTQRDLNIALMNELALIFDRLGIDTSEVLAAA GSKWNFLNFKPGLVGGHCIGVDPYYLTYQAEKIGYIPQVILAGRRINDGMGKFIAQRAVKEIIRAGHHVLGSYVTVLGLT FKENCPDLRNSKVVDILTELSDYGLKVQVCDPIADPAEAQQAYGVTLKEPEKLHPAVAVIAAVAHDSYRAWGAAKFASLM VENPVLIDVKGIYDSRAMSAAGIRVWCL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| cap1L | AAA64651.1 | type 1 capsule synthesis gene | Virulence | SCCcap1 | Protein | 9e-116 | 59 |
| tviB | NP_458740.1 | Vi polysaccharide biosynthesis protein, UDP-glucose/GDP-mannose dehydrogenase | Virulence | SPI-7 | Protein | 1e-98 | 53 |
| tviB | NP_807945.1 | VI polysaccharide biosynthesis UDP-glucose/GDP-mannose dehydrogenase | Virulence | SPI-7 | Protein | 1e-98 | 53 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| GM21_2494 | YP_003022294.1 | nucleotide sugar dehydrogenase | VFG0431 | Protein | 4e-99 | 53 |
