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Name : GM21_2445 (GM21_2445) Accession : YP_003022246.1 Strain : Geobacter sp. M21 Genome accession: NC_012918 Putative virulence/resistance : Virulence Product : nucleotide sugar dehydrogenase Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG0677 EC number : - Position : 2852866 - 2854152 bp Length : 1287 bp Strand : - Note : TIGRFAM: nucleotide sugar dehydrogenase; PFAM: UDP-glucose/GDP-mannose dehydrogenase; UDP-glucose/GDP-mannose dehydrogenase dimerisation; UDP-glucose/GDP-mannose dehydrogenase; KEGG: gbm:Gbem_1805 nucleotide sugar dehydrogenase DNA sequence : TTGACGGTAGAGCGTATTGTCTCAGTGGTAGGGCTAGGGTACGTGGGGCTTCCGGTTGCGGTTGCCTTCGGCAAGGTGCG CCGCACCATAGGCTTCGACATCAACGGCACCAGGATCAAGGAGCTGCGCGAAGGGTACGACCGGACCGCCGAGGTGGAGC CGGGGGACCTGACGCAAGCAGACATCCTGTTCACGGACCGGGTCGAGGACTTGAGGGAGGCCAACTTCCACATCGTTGCG GTCCCGACCCCGATCGACGAGGCGAACCAGCCGGATCTGAGCCTCGTCTGCCGTGCCAGCGAGACCGTGGGGAAGGCGCT TAAAAAGGGCGACATCGTGGTCTACGAGTCCACCGTCTATCCCGGGGTCACCGAGGACGAGTGCGTCCCCATCCTGGAAC GGGTCTCGGGCCTCAAGGGCGGAGTCGACTTCAAGGTGGGGTACAGCCCGGAGCGGATCAACCCCGGCGACAAGGAGCAC ACCTTCACCAAGATCAAGAAGGTGGTCTCCGGGCAGGACCAGGAGACCCTGGAGACGGTGGCGCAGGTCTACGGCTCGGT GGTGACGGCGGGGGTGTTCCGCGCCTCCTCCATTAAGGTGGCGGAAGCGGCCAAGGTGATCGAGAACACCCAGCGCGACC TGAACATCGCCCTCATGAACGAACTGGCCCTCATCTTCGACCGCCTGGGGATCAACACCTCGGAGGTGCTGGCGGCCGCC GGTAGCAAGTGGAACTTCCTCAAATTCTCGCCGGGGCTCGTCGGCGGGCACTGCATCGGCGTCGACCCCTACTACCTCAC CCACAAGGCGGAGAAGCTCGGCTACATCCCGCAGGTGATCCTGGCGGGGCGGCGCATCAACGACGGCATGGGGAAATTCG TGGCGCAGCGCGCCGTGAAGGAGATCATCAGGGCCGGGCACCCGGTGCTGAACGCGGTGGTCACGGTGCTTGGGATCACC TTCAAGGAGAACTGCCCCGACATCAGGAACTCCAGGGTGATCGACATCGTCAAGGAACTCCTGGATTACGGGATGCAGGT CCAGGTCTGCGACCCCTTGGCCGACCCGGAGGAGACGCTGCACGAGTACGGGGTGCGGCTCACCCCGAGGGCGCAGTTGA AGCCCGCAGTGGCGGTGGTGGCCGCCGTGGCCCACGCGGAATTCGCTTCCCTCACTGCACCTGAACTCTTGGCGCTCATG GGGCCCAAACCGGTCTTGATCGACGTGAAGAGCATGTTCGACCGGGAACGGGTCGAAGGCGCCGGTATCAAGGTCTGGAC GTTATAA Protein sequence : MTVERIVSVVGLGYVGLPVAVAFGKVRRTIGFDINGTRIKELREGYDRTAEVEPGDLTQADILFTDRVEDLREANFHIVA VPTPIDEANQPDLSLVCRASETVGKALKKGDIVVYESTVYPGVTEDECVPILERVSGLKGGVDFKVGYSPERINPGDKEH TFTKIKKVVSGQDQETLETVAQVYGSVVTAGVFRASSIKVAEAAKVIENTQRDLNIALMNELALIFDRLGINTSEVLAAA GSKWNFLKFSPGLVGGHCIGVDPYYLTHKAEKLGYIPQVILAGRRINDGMGKFVAQRAVKEIIRAGHPVLNAVVTVLGIT FKENCPDIRNSRVIDIVKELLDYGMQVQVCDPLADPEETLHEYGVRLTPRAQLKPAVAVVAAVAHAEFASLTAPELLALM GPKPVLIDVKSMFDRERVEGAGIKVWTL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| cap1L | AAA64651.1 | type 1 capsule synthesis gene | Virulence | SCCcap1 | Protein | 1e-114 | 58 |
| tviB | NP_458740.1 | Vi polysaccharide biosynthesis protein, UDP-glucose/GDP-mannose dehydrogenase | Virulence | SPI-7 | Protein | 9e-105 | 55 |
| tviB | NP_807945.1 | VI polysaccharide biosynthesis UDP-glucose/GDP-mannose dehydrogenase | Virulence | SPI-7 | Protein | 9e-105 | 55 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| GM21_2445 | YP_003022246.1 | nucleotide sugar dehydrogenase | VFG0431 | Protein | 4e-105 | 55 |
