Gene Information

Name : GM21_0227 (GM21_0227)
Accession : YP_003020070.1
Strain : Geobacter sp. M21
Genome accession: NC_012918
Putative virulence/resistance : Virulence
Product : transcriptional regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 270372 - 271046 bp
Length : 675 bp
Strand : +
Note : PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; KEGG: gbm:Gbem_0243 transcriptional regulator

DNA sequence :
ATGAGAATTTTGGTAGTTGAAGATGAGAAGAAGGTCGCCAGCTTCATCAAGCGCGGGCTGGAGGAGGAGCAGTACGAAGT
CCACACGGCCGCGGACGGAGAGGAAGGTCTCAAGCTTGCGCTCGAGAAGCCGTTCGACCTGATCGTGCTTGACTGGATGC
TCCCCAAAAAGGACGGCCTTTCCGTCCTGAAGGAGCTGAGGGAGCGGAAGAACCTCACTCCGATCCTGATGCTGACCGCC
AAAGATTCCGTGGAAGATATCGTGGCAGGCCTCGACTCCGGATCCGACGACTACCTGACCAAGCCGTTCGCCTTTGCCGA
GCTTTTGGCCCGCGTCCGTGCGCTCATGAGGAGGAGCGAGCTCGACCGCGGCGCCGAGATCCGTTTCGCCGACCTGCGCC
TCGACCCGGTCACCCATAAGGTATGGCGCAAGGACAAGGAGATCGATCTCACCGCGAAGGAATACGGCCTGCTCGAATAC
TTCATGCGCAACCCGCACCAGGTGCTGACCAGGACCATGATCGCGGAGCATGTCTGGGACTACACCTTCGACAGCTTCAC
CAACATCATCGACGTCTACGTCAATTACCTCAGGAAGAAGATCGACCGCGAAGCAGACAAAAAGCTGATCCACACCGTCA
GGGGCGTAGGGTACATCCTGAAGGAAGAAGAATAG

Protein sequence :
MRILVVEDEKKVASFIKRGLEEEQYEVHTAADGEEGLKLALEKPFDLIVLDWMLPKKDGLSVLKELRERKNLTPILMLTA
KDSVEDIVAGLDSGSDDYLTKPFAFAELLARVRALMRRSELDRGAEIRFADLRLDPVTHKVWRKDKEIDLTAKEYGLLEY
FMRNPHQVLTRTMIAEHVWDYTFDSFTNIIDVYVNYLRKKIDREADKKLIHTVRGVGYILKEEE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 2e-40 47
copR AAC33719.1 regulatory protein CopR Not tested SPI-5 Protein 9e-40 46

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
GM21_0227 YP_003020070.1 transcriptional regulator BAC0111 Protein 2e-48 49
GM21_0227 YP_003020070.1 transcriptional regulator BAC0308 Protein 1e-44 49
GM21_0227 YP_003020070.1 transcriptional regulator BAC0125 Protein 2e-46 48
GM21_0227 YP_003020070.1 transcriptional regulator BAC0638 Protein 3e-41 48
GM21_0227 YP_003020070.1 transcriptional regulator BAC0197 Protein 2e-42 48
GM21_0227 YP_003020070.1 transcriptional regulator BAC0347 Protein 6e-43 46
GM21_0227 YP_003020070.1 transcriptional regulator HE999704.1.gene1528. Protein 1e-37 46
GM21_0227 YP_003020070.1 transcriptional regulator BAC0083 Protein 3e-46 45
GM21_0227 YP_003020070.1 transcriptional regulator NC_010079.5776364.p0 Protein 6e-40 44
GM21_0227 YP_003020070.1 transcriptional regulator NC_002952.2859858.p0 Protein 6e-40 44
GM21_0227 YP_003020070.1 transcriptional regulator NC_007622.3794948.p0 Protein 6e-40 44
GM21_0227 YP_003020070.1 transcriptional regulator NC_003923.1003417.p0 Protein 6e-40 44
GM21_0227 YP_003020070.1 transcriptional regulator NC_013450.8614146.p0 Protein 6e-40 44
GM21_0227 YP_003020070.1 transcriptional regulator NC_002951.3238224.p0 Protein 6e-40 44
GM21_0227 YP_003020070.1 transcriptional regulator NC_007793.3914065.p0 Protein 6e-40 44
GM21_0227 YP_003020070.1 transcriptional regulator NC_002758.1121390.p0 Protein 6e-40 44
GM21_0227 YP_003020070.1 transcriptional regulator AE015929.1.gene1106. Protein 5e-36 44
GM21_0227 YP_003020070.1 transcriptional regulator NC_002952.2859905.p0 Protein 2e-38 44
GM21_0227 YP_003020070.1 transcriptional regulator NC_013450.8614421.p0 Protein 2e-38 44
GM21_0227 YP_003020070.1 transcriptional regulator NC_007793.3914279.p0 Protein 2e-38 44
GM21_0227 YP_003020070.1 transcriptional regulator NC_003923.1003749.p0 Protein 2e-38 44
GM21_0227 YP_003020070.1 transcriptional regulator NC_002745.1124361.p0 Protein 2e-38 44
GM21_0227 YP_003020070.1 transcriptional regulator NC_009782.5559369.p0 Protein 2e-38 44
GM21_0227 YP_003020070.1 transcriptional regulator NC_002951.3237708.p0 Protein 2e-38 44
GM21_0227 YP_003020070.1 transcriptional regulator NC_007622.3794472.p0 Protein 2e-38 44
GM21_0227 YP_003020070.1 transcriptional regulator NC_002758.1121668.p0 Protein 2e-38 44
GM21_0227 YP_003020070.1 transcriptional regulator NC_009641.5332272.p0 Protein 2e-38 44
GM21_0227 YP_003020070.1 transcriptional regulator NC_012469.1.7685629. Protein 5e-30 42
GM21_0227 YP_003020070.1 transcriptional regulator HE999704.1.gene2815. Protein 8e-35 42
GM21_0227 YP_003020070.1 transcriptional regulator AE016830.1.gene1681. Protein 1e-39 41
GM21_0227 YP_003020070.1 transcriptional regulator NC_008702.1.4607594. Protein 4e-28 41
GM21_0227 YP_003020070.1 transcriptional regulator AE000516.2.gene3505. Protein 4e-32 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
GM21_0227 YP_003020070.1 transcriptional regulator VFG1390 Protein 5e-52 51
GM21_0227 YP_003020070.1 transcriptional regulator VFG0596 Protein 9e-41 47
GM21_0227 YP_003020070.1 transcriptional regulator VFG1386 Protein 1e-45 43
GM21_0227 YP_003020070.1 transcriptional regulator VFG1389 Protein 4e-40 43