Gene Information

Name : GM21_2055 (GM21_2055)
Accession : YP_003021865.1
Strain : Geobacter sp. M21
Genome accession: NC_012918
Putative virulence/resistance : Resistance
Product : ABC transporter
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 2381186 - 2381854 bp
Length : 669 bp
Strand : +
Note : PFAM: ABC transporter; SMART: ATPase AAA; KEGG: gbm:Gbem_2167 ABC transporter

DNA sequence : 
ATGGCACTCATTGAAATCAAGGATGTAAAGAAGCAGTATCAGACCGGCTCGGACACGGTCGAGGCCCTTCGCGGCGTGAA
TATCAGCATCGAGGCGGGTGAGTTCATCACCATCATGGGGCAATCCGGCTCAGGAAAGAGCACCCTTCTGTCGGTCCTTG
GGGGGATGAACCATCCCACCAGCGGCGAGGTGGAGATGGCGGGGGTGAAGCTCTACCAGCTTCCCAGCGAGAAACTGGCC
GATTTCCGGGCGCAGAACCTGGGATTCGTCTTCCAGTCCTTCCATCTGATCCAGTATCTGACCGCGCTGGAGAACGTGAT
GCTGCCGCTGGCCATCGTCAAGATGTCAACCGCCGCCAAAAAGGACGCCGCCCGCTCTGCACTTGAGCGGGTAGGGCTTG
GCGGCAAAGCGGACCGGCTCCCGAACCAACTCTCCGGCGGCGAGCAGGAAAGGGTCGCCATCGCCCGCGCCATAGTGAAC
AACCCGCACATCCTTTTGGCGGACGAGCCCACAGGAAACCTCGACTCCAAAACCAGCGAGGAAGTCATGGCGTTGTTCCG
GCAACTGAATGAGGCGGGCCAGACCGTGGTCATGGTTACTCACAACCCGGAGAACGGCACTTACTCCGATAGGACCATAA
GCTTGAGGGACGGTCTGGTCAGCGCATAG

Protein sequence : 
MALIEIKDVKKQYQTGSDTVEALRGVNISIEAGEFITIMGQSGSGKSTLLSVLGGMNHPTSGEVEMAGVKLYQLPSEKLA
DFRAQNLGFVFQSFHLIQYLTALENVMLPLAIVKMSTAAKKDAARSALERVGLGGKADRLPNQLSGGEQERVAIARAIVN
NPHILLADEPTGNLDSKTSEEVMALFRQLNEAGQTVVMVTHNPENGTYSDRTISLRDGLVSA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cur_1502 YP_001800896.1 cell division ATP-binding protein FtsE Not tested Not named Protein 1e-35 44
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-38 42
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-40 42
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 2e-40 42
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-40 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
GM21_2055 YP_003021865.1 ABC transporter NC_012469.1.7686878. Protein 7e-50 46
GM21_2055 YP_003021865.1 ABC transporter CP001581.1.gene598.p Protein 3e-42 45
GM21_2055 YP_003021865.1 ABC transporter NC_008702.1.4606598. Protein 3e-40 45
GM21_2055 YP_003021865.1 ABC transporter NC_012469.1.7685735. Protein 2e-38 43