Gene Information

Name : GM21_1635 (GM21_1635)
Accession : YP_003021448.1
Strain : Geobacter sp. M21
Genome accession: NC_012918
Putative virulence/resistance : Virulence
Product : Fis family transcriptional regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG2204
EC number : -
Position : 1905359 - 1906732 bp
Length : 1374 bp
Strand : +
Note : PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; response regulator receiver; ATPase associated with various cellular activities AAA_5; SMART: response regulator receiver; ATPase AAA; KEGG: gbm:Gbem_2591 Fis family t

DNA sequence : 
ATGCGCGCCAGGATACTGGTAGTCGACGATGAACTGAGTATGCGTGAATTTCTCTCCATCCTGCTGGAAGGGGAGGGGTA
CCTGGTCGACCAGGCGGAGAGCGCCGAAGACGCGCTGCGCTGCATGGGAGAGCAGCGCTACGAGATGGTGATCTCGGACG
TCCTGATGCCCGGACTTGGGGGAATCGAGCTCCTCTCCAGGATCAAGAGCGAGTCCCCCGAGACAGCGGTGCTGATGATC
ACCGCCTTCACCACGGCCGAGCAGGCGGTCGAGGCTATGAAGCTTGGGGCTTACGACTACATCGGCAAGCCTTTCAAGGT
GGAAGAGGTGAAGGTGCTGGTCAGAAACGCCCTGGAAAAGCAGAGCCTGGTCCAGGAGAACAAACGGCTGAAGGCCGAGG
TGCAGGAGCGTTTCAGCTTTTCCGGCCTGATCGGCAAGAGCAAGCAGATGCGTGAGGTGTACGACCTGATCGCCAAGGTG
GCCGACAGCACGGCCAACGTGCTCATCACCGGCGAGAGCGGCACCGGCAAGGAGCTGGCCGCGAAGGCGATCCATTACAA
CTCCCCCCGAAAAAGCGCCCCCTTCGTCGCGGTCAACTGCGGAGCCATTCCCGAAACCCTGATAGAGAGCGAGCTCTTCG
GGCACGCCAAGGGAGCTTTTACCGGCGCCATCGCCGATCGTCCCGGTCTCTTCGAACAGGCCGAAGGGGGGACGCTGTTT
CTCGACGAGATCGGCGAGGTGCCGCTTCAGTTGCAGGCGAAGCTCTTGCGGGTGCTCCAGGAGCGCGAGTTCCGCCGGGT
GGGGGGCGTGGCCTCGCTCAAGGCGGACGTGCGCATCGTAGCCGCCTCCAACCGCAACCTCGAAGAGCAGGTGCGGGAGG
GTTCCTTCCGCGAGGACCTTTTCTACCGCCTCAACGTGGTCATGCTCCGCATGCCTTCGCTCAAGGAGCGGGCCGAGGAC
ATCCCGGCCCTGGTCGAGCACTTCTACAAGAAGTACTCCCTTTGGTCCGGCGCCGAAGAGATCATCACCCCAGACGCGCT
GAAGGCCCTGTTCAACTACCCCTTCCCAGGCAACGTGAGGGAGCTGGAGAACCTGGTTGAGCGCTGTGTCGTGCTGGGGA
GCCGCGTCATCGCCCTCGACTGCCTCCCCGCCAGCGTGCGCGATCATAAAAGTGCCGCGCCGGCAAGCGGCCCGACGGAG
ATACCCGAAGAGGGAATGGACCTGCAGGCGTACCTGGACAACCTGGAGCAAAAGCTCCTGGTGCAGGCGTTGGAGAAGTG
CGGCGGGGTGAAGAAGCGGGCGGCGGCGCTTTTGGGTATGACCTTCCGCTCCTTCCGCTACCGGTTGGCGAAATTCGGCA
TGGACGAGGAGTAG

Protein sequence : 
MRARILVVDDELSMREFLSILLEGEGYLVDQAESAEDALRCMGEQRYEMVISDVLMPGLGGIELLSRIKSESPETAVLMI
TAFTTAEQAVEAMKLGAYDYIGKPFKVEEVKVLVRNALEKQSLVQENKRLKAEVQERFSFSGLIGKSKQMREVYDLIAKV
ADSTANVLITGESGTGKELAAKAIHYNSPRKSAPFVAVNCGAIPETLIESELFGHAKGAFTGAIADRPGLFEQAEGGTLF
LDEIGEVPLQLQAKLLRVLQEREFRRVGGVASLKADVRIVAASNRNLEEQVREGSFREDLFYRLNVVMLRMPSLKERAED
IPALVEHFYKKYSLWSGAEEIITPDALKALFNYPFPGNVRELENLVERCVVLGSRVIALDCLPASVRDHKSAAPASGPTE
IPEEGMDLQAYLDNLEQKLLVQALEKCGGVKKRAAALLGMTFRSFRYRLAKFGMDEE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00300 YP_008207765.1 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains Not tested AbaR25 Protein 4e-74 41
BJAB0868_00304 YP_008211630.1 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains Not tested AbaR26 Protein 4e-74 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
GM21_1635 YP_003021448.1 Fis family transcriptional regulator BAC0089 Protein 4e-91 46
GM21_1635 YP_003021448.1 Fis family transcriptional regulator BAC0467 Protein 6e-78 44

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
GM21_1635 YP_003021448.1 Fis family transcriptional regulator VFG1214 Protein 3e-79 43
GM21_1635 YP_003021448.1 Fis family transcriptional regulator VFG0116 Protein 9e-60 43