Gene Information

Name : GM21_1207 (GM21_1207)
Accession : YP_003021026.1
Strain : Geobacter sp. M21
Genome accession: NC_012918
Putative virulence/resistance : Virulence
Product : type VI secretion protein
Function : -
COG functional category : S : Function unknown
COG ID : COG3516
EC number : -
Position : 1414396 - 1414926 bp
Length : 531 bp
Strand : +
Note : TIGRFAM: type VI secretion protein, VC_A0107 family; PFAM: conserved hypothetical protein; KEGG: gbm:Gbem_3043 type VI secretion protein, VC_A0107 family

DNA sequence :

ATGGCAAAGTCCGAGAGCCTGCAACACAAGTTGGAACGCGTGCGGGCGCCCCGTGTCCGCATCACCTACGACGTGGAGAC
CGGGGGCGGCATCGAGATGAAGGAGATCCCTTTCGTGGTGGGGGTGCTCGCCGACCTGTCGGGGAAGCCGGATCAACCCC
TGCCGAGGCTGAAGGAGAGGAGCTTCGTGGAAGTGGACCGCGACAACATTGATTCGGTCTTGGAGGGAATGCGGCCGAGA
GCTGCGTTCCGGGTCCCGAACCGGCTGGTGGAAGACGGCTCCCAACTCGCCGTCGACCTCCGTTTCACAAGTCTCGATGA
CTTTCATCCGGAGAAGGTGGCCCTGCAGGTGGAGCCGCTTCGGAGACTGGTCGAGGCGCGGAAGAGGCTCTCGGATCTGC
TCGCGAGGCTCGACGGCAACGACCGGCTCGAACAGCTGCTGCGGGGGGCGTTATCCAGTCCGGATGCGCTGAAACTCATC
TGTGAGGAGGCGAAGAGCGCCAAGGCACCCGACACTGAGAGCGCCGGATAA

Protein sequence :

MAKSESLQHKLERVRAPRVRITYDVETGGGIEMKEIPFVVGVLADLSGKPDQPLPRLKERSFVEVDRDNIDSVLEGMRPR
AAFRVPNRLVEDGSQLAVDLRFTSLDDFHPEKVALQVEPLRRLVEARKRLSDLLARLDGNDRLEQLLRGALSSPDALKLI
CEEAKSAKAPDTESAG

• Homologs from PAI DB

Gene	GenBank Accn	Product	Virulance or Resistance	PAI or REI	Alignment Type	E-val	Identity
STY0297	NP_454879.1	conserved hypothetical protein	Not tested	SPI-6	Protein	2e-28	43

• Homologs from VFDB (virulence genes)

Gene	GenBank Accn	Product	ID of source DB	Alignment Type	E-val	Identity
GM21_1207	YP_003021026.1	type VI secretion protein	VFG2069	Protein	3e-30	43