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Name : PC1_0847 (PC1_0847) Accession : YP_003016434.1 Strain : Pectobacterium carotovorum PC1 Genome accession: NC_012917 Putative virulence/resistance : Unknown Product : integrase family protein Function : - COG functional category : L : Replication, recombination and repair COG ID : COG4974 EC number : - Position : 984240 - 985364 bp Length : 1125 bp Strand : + Note : PFAM: integrase family protein; KEGG: eca:ECA0546 shufflon-specific DNA recombinase DNA sequence : GTGAAAAAACGCATAAAAAAGATACTGTTAAGTAAAGCATTGGATAAGTATTTTTCCACGGTTTCGCGACATAAACGTGG ACAATTGCAGGAGTTCTATCGAATCAACGTTATCAAGCGTTCGCGCTTGGCTAATAGAAATATGGATGAAATTTCATCTA TAGATATTGCAGAATATAGAGATAATAGATTATCGGAATTTAACGCTAGAACGCAAAAGCCGATAAGTGCGAATACTGTG CGACTGGAATTAGCATTGTTATCGGCGCTTTATAATCTGGCAAAAGTTGAGTGGGGTACATGCTCTATAAACCCCGTTGA AAATGTTCGCAAGCCTACCGTATCGTCAGGTCGTACCCGGAGGCTAACGACTCAGGAAGAACGGCAGCTAACCAGATACT TCAAAGATAAAAATCCTGAATTATTGGCTATTTTTCAGATCGCGTTGGAAACGGGAATGCGGCAAGGCGAAATTTTGTCG TTGCGATGGGAATATACCGATCTTCGCCTTGGCGTTGCCCATTTACCTTTGACGAAAAATGGGACATCACGAGACGTTCC ATTATCATCAAAAGCACGGCAAATTCTGTATGGCCTGGGTGAACGGCCACATCATGAGAATGGCTATATTTTTAGCTACA CGTCGAGTGGGTTTAAAAGCGCATGGCGTGTGGCTCTGAAGGCTCTGGCTATCGACGATCTGCATTTTCACGATCTCAGA CATGAGGCAATCAGCCGATTCTTTGAACTGGGAACATTAAATGTTATGGAAGTGGCGGCAATATCAGGCCATAAATCAAT GAATATGTTAAAACGCTATACCCACCTTCGTGCAGCTCACCTCGTGAATAAGCTTGATGCACATAAGAAACAGGCTAAAA AACTAGCCTCCATCTTTATTCCCTACCCAGCGGATATTGATATCGATGATACAACGGTTACGCTGAAATTCTCCGATCTT GATAACCTGTCTGTGACGGCTTCAACGCATGATGATGCTCTGAAAATTGCCTCTGTGGAATTACTTCGATTTCAGGCTAT AGCAGCGAAAAATGGGAAGAGACTTCCGCCACCCGGAGCTATCTCAGTCAATTCGATTGATCGAGTTCTTATCAGTCCAC TGTAA Protein sequence : MKKRIKKILLSKALDKYFSTVSRHKRGQLQEFYRINVIKRSRLANRNMDEISSIDIAEYRDNRLSEFNARTQKPISANTV RLELALLSALYNLAKVEWGTCSINPVENVRKPTVSSGRTRRLTTQEERQLTRYFKDKNPELLAIFQIALETGMRQGEILS LRWEYTDLRLGVAHLPLTKNGTSRDVPLSSKARQILYGLGERPHHENGYIFSYTSSGFKSAWRVALKALAIDDLHFHDLR HEAISRFFELGTLNVMEVAAISGHKSMNMLKRYTHLRAAHLVNKLDAHKKQAKKLASIFIPYPADIDIDDTTVTLKFSDL DNLSVTASTHDDALKIASVELLRFQAIAAKNGKRLPPPGAISVNSIDRVLISPL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| rci | NP_458640.1 | shufflon-specific DNA recombinase | Not tested | SPI-7 | Protein | 2e-99 | 64 |
| rci | NP_807850.1 | shufflon-specific DNA recombinase | Not tested | SPI-7 | Protein | 2e-99 | 64 |
| rci | AAC38070.2 | Rci | Not tested | SPI-7 | Protein | 1e-99 | 64 |
| unnamed | ABR13530.1 | site-specific recombinase | Not tested | PAGI-8 | Protein | 2e-27 | 44 |
