Gene Information

Name : PC1_0799 (PC1_0799)
Accession : YP_003016389.1
Strain : Pectobacterium carotovorum PC1
Genome accession: NC_012917
Putative virulence/resistance : Virulence
Product : 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein
Function : -
COG functional category : C : Energy production and conversion
COG ID : COG0437
EC number : -
Position : 931834 - 932532 bp
Length : 699 bp
Strand : -
Note : PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: eca:ECA0914 putative component of polysulfide reductase

DNA sequence :
ATGGAAGAATTATCTCGCCGTCGTTTTATTGCCTATATGGGAAGCGCGATTGCCATTAGTGGGCCGGTCGGTTTCGCCAA
AGCGCAAAATGAATCAGAAAACGCACAGGGTAAATTACCCGTGAAATATGGCTTATTACATAACGAAATGCGCTGTATTG
GATGTAAAGCCTGTATCAAGGCCTGCAAAGAAACGAATAACGTTCCTGATGGCGTCACCCGCCTGGATATATTGCAAACC
GTCGATATTCCCGCCGTTGAGAAAACGCGTGCGATTAAGCAATTTTTCCGCAAATCCTGTCAGCACTGTGAGAACCCGCC
CTGCGTTGCCGTCTGCCCAACAGGCGCATCTTTCAAAGATGCGCTCACCGGTATTGTCGACGTCAATGACAAGCGCTGCG
TAGGCTGCCGCTACTGCATTGCCGCCTGTCCTTACCATGTGCGTTTCATCAACCCGGTCACGAAGACGGCAGACAAATGT
AACTTTTGTCGGCAAACCAATCTGGCCGCCGGGAAACAGCCCGCCTGCGTCGAAATCTGCCCCACCAAAGCCTTGGTATT
TGGCGATCTCAACGATCCTGAAAGCAACATTGCCAAGATGATCGCCAGCAACGCGACCTACCGTTCCAAGGTTTATCTGG
GCACCGAACCCCAGCTCTACCGTATGCCGGGGAAACGAGGAGAAATCGACAATGCATAA

Protein sequence :
MEELSRRRFIAYMGSAIAISGPVGFAKAQNESENAQGKLPVKYGLLHNEMRCIGCKACIKACKETNNVPDGVTRLDILQT
VDIPAVEKTRAIKQFFRKSCQHCENPPCVAVCPTGASFKDALTGIVDVNDKRCVGCRYCIAACPYHVRFINPVTKTADKC
NFCRQTNLAAGKQPACVEICPTKALVFGDLNDPESNIAKMIASNATYRSKVYLGTEPQLYRMPGKRGEIDNA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ttrB YP_216393.1 tetrathionate reductase complex subunit B Virulence SPI-2 Protein 3e-27 42
ttrB NP_805056.2 tetrathionate reductase subunit B Virulence SPI-2 Protein 3e-27 42
ttrB NP_460350.1 tetrathionate reductase complex subunit B Virulence SPI-2 Protein 3e-27 42
ttrB CAB37414.1 tetrathionate reductase subunit B (TtrB) Virulence SPI-2 Protein 2e-27 42
ttrB NP_456142.1 tetrathionate reductase subunit B Virulence SPI-2 Protein 3e-27 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PC1_0799 YP_003016389.1 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein VFG0486 Protein 1e-27 42