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Name : PC1_0785 (PC1_0785) Accession : YP_003016375.1 Strain : Pectobacterium carotovorum PC1 Genome accession: NC_012917 Putative virulence/resistance : Unknown Product : Fis family NifA subfamily transcriptional regulator Function : - COG functional category : K : Transcription COG ID : COG3604 EC number : - Position : 918092 - 919684 bp Length : 1593 bp Strand : + Note : PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; GAF domain protein; SMART: GAF domain protein; AAA ATPase; KEGG: eca:ECA0903 anaerobic nitric oxide reductase transcription regulator DNA sequence : ATGACATTGATTAACTATTGTCTTAATGACACAGATTTGTCATTAGGACACGCCATGACGCTCTCCATCAATGCCCTTGC CCGCATCGCTATCGAGCTGCAAATGGGGCTATCGAATCAGGATCGTTTTCAGCGCTTGATTAACAGCCTGCGCCAGCTGC TGCGCTGTGATGCCTCGGCGCTGTTACGCTACGAAAATCAGCTGTTTCGCCCGCTGGCGATCGACGGTCTGGCGCCGGAC GTGTTGGGGCGACGCTTTCGTCTGTCCGATCATCCCCGTCTGGAGGCCATTGCCCGTGCGGGTGACGTGGTACGCTTTCC GGCGGACAGCCAGCTTCCCGATCCGTATGACGGCCTGATCCCCAGTCAGGAGGATCTTAAGGTGCACGCCTGCGTCGGCC TGCCGCTGTTTGCCAATCAGAACCTGATCGGGGCGCTGACCGTGGACGGTATGGATCCCTGCCAGTTCGACCATTTTAGT GACGAAGAACTGCGGCTGGTGGGGGCGATGGCGGCGGCAGCGCTGAGTAACGCGCTGCTGATGGAACGCCTTGAGCGGCA GTTGCCTGCGCCAGTGCGTGCCGAAAGTCCTGCGGCGGAAAGCGTGGAGGAAATGGTGGGGCTGTCGGAGCCGATGTTGC GGCTAAAGAAAGAGGTCGATATCGTCGCGGGCTCCGATCTGAACGTGCTGATTATGGGAGAAACTGGCGTTGGTAAAGAG CTGGTGGCGCGCGCGATTCATCGTGGTTCCAGCCGGGCAATTCATCCTCTGGTGTACCTGAACTGTGCCGCGCTGCCGGA ATCGGTCGCAGAGAGTGAACTGTTTGGCCATGTGAAGGGCGCATTTACTGGTGCAATCCATCACCGCACTGGCAAGTTTG AAATGGCGGATAACGGCACGCTATTTCTGGATGAGATTGGCGAACTGTCGCTGACGCTACAGGCTAAGCTGCTGCGCGTA TTGCAGTATGGCGATCTCCAGCGCGTGGGGGATGACAGCAGCCTGAAAGTGAACGTACGCGTGCTCGCAGCGACTAACCG CGATCTGCGGCAGGCGGTGCTGGATGGTGCTTTCCGTGCCGATTTGTTCCACCGTTTGAGCGTGTTTCCGCTATCTGTAC CGCCGCTACGTGAGCGTAGTCAGGATGTGGCGCTGTTGGCCGGGTTCTTCTGTGAGCGTAGCCGCGTGCAACTGGGGCTG GCGCGACTGGCGTTGACGGCAGACGCGGGCGCGCTGTTGGAACAATACGACTGGCCGGGGAATGTGCGCGAGCTGGAACA CGCTATTTATCGTGCCACCGTGTTGGCGAGAGCAGGGCAGGAATCGGGTGAGGTGCTGTTAGGCCCTGAACATTTCAATC TTGAACTTTACTCCCAGCCTGTTCATACCCCCGCAGGAGCCCCGAGTGCTACCGACAGCGTACCGGATTATTTCATCAGC GGCGGCTTGCGAGAGGCAACGGACGACTATCAGCGTCGGATCATCCAACACACGCTGGCGCGTCATGAGGGCAACTGGTC ATCCTGCGCGAGAGAACTGGAAATAGACAGCGGCAACCTACACCGTCTGGCGAAGCGGCTGGGTATCAAATAA Protein sequence : MTLINYCLNDTDLSLGHAMTLSINALARIAIELQMGLSNQDRFQRLINSLRQLLRCDASALLRYENQLFRPLAIDGLAPD VLGRRFRLSDHPRLEAIARAGDVVRFPADSQLPDPYDGLIPSQEDLKVHACVGLPLFANQNLIGALTVDGMDPCQFDHFS DEELRLVGAMAAAALSNALLMERLERQLPAPVRAESPAAESVEEMVGLSEPMLRLKKEVDIVAGSDLNVLIMGETGVGKE LVARAIHRGSSRAIHPLVYLNCAALPESVAESELFGHVKGAFTGAIHHRTGKFEMADNGTLFLDEIGELSLTLQAKLLRV LQYGDLQRVGDDSSLKVNVRVLAATNRDLRQAVLDGAFRADLFHRLSVFPLSVPPLRERSQDVALLAGFFCERSRVQLGL ARLALTADAGALLEQYDWPGNVRELEHAIYRATVLARAGQESGEVLLGPEHFNLELYSQPVHTPAGAPSATDSVPDYFIS GGLREATDDYQRRIIQHTLARHEGNWSSCARELEIDSGNLHRLAKRLGIK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| norR | ABD94719.1 | putative nitric oxide reductase transcriptional regulator | Not tested | ExoU island B | Protein | 1e-100 | 48 |
