|
Name : PC1_0724 (PC1_0724) Accession : YP_003016314.1 Strain : Pectobacterium carotovorum PC1 Genome accession: NC_012917 Putative virulence/resistance : Unknown Product : SsrA-binding protein Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG0691 EC number : - Position : 845847 - 846329 bp Length : 483 bp Strand : - Note : TIGRFAM: SsrA-binding protein; PFAM: SmpB protein; KEGG: eca:ECA0836 SsrA-binding protein DNA sequence : ATGACAAAGAAAAAAGCATACAAACCCGGTTCCGCCACCATTGCGCAGAACAAGCGCGCCCGTCACGAATACTTCATTGA GGAAGAATTTGAGGCTGGCCTTGCTCTGCAAGGATGGGAAGTCAAATCACTGCGCGCAGGCAAAGCCAACCTCAGCGACA GCTATGTCACCTTCATGAACGGTGAAGCTTACCTGTTTGGCGCCACCATCACGCCGCTGAATGTAGCGTCATCACACGTT GTTTGCGATCCTATCCGCACGCGCAAACTCCTGCTCAACAAACGCGAGCTAGAGTCGCTGTTTGGCCGCGTCAGTCGTGA AGGCTATACGGTCGTCGCGCTGTCCATGTATTGGAAAAATGCCTGGAGCAAAGTCAAAATTGGCGTAGCGAAAGGTAAAA AAGATCACGACAAGCGTGATGACATTAAAGAACGTGAATGGAAGTTAGACAAAGCCCGTATCATGAAGAACGCCAATCGC TAA Protein sequence : MTKKKAYKPGSATIAQNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANLSDSYVTFMNGEAYLFGATITPLNVASSHV VCDPIRTRKLLLNKRELESLFGRVSREGYTVVALSMYWKNAWSKVKIGVAKGKKDHDKRDDIKEREWKLDKARIMKNANR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| smpB | NP_230495.1 | SsrA-binding protein | Not tested | VPI-1 | Protein | 1e-49 | 66 |
| unnamed | AET14351.1 | SsrA-binding protein | Not tested | SaPI68111 | Protein | 2e-26 | 48 |
| smpB | YP_001800894.1 | SsrA-binding protein | Not tested | Not named | Protein | 5e-21 | 45 |
