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Name : PC1_0723 (PC1_0723) Accession : YP_003016313.1 Strain : Pectobacterium carotovorum PC1 Genome accession: NC_012917 Putative virulence/resistance : Unknown Product : integrase family protein Function : - COG functional category : L : Replication, recombination and repair COG ID : COG0582 EC number : - Position : 844042 - 845250 bp Length : 1209 bp Strand : - Note : PFAM: integrase family protein; KEGG: ypg:YpAngola_A1370 prophage CP4-57 integrase DNA sequence : ATGCCAAGAATTGCCCGCCCTCTAACACATACCGAAGTCAGCAAAGCACGAACGCCTGATAAAGAGCTAAGCCTGCATGA TGGCGATGGCCTCTTTCTACTTATCAAACCGTCAGGGAAAAAATTATGGCGGTTTCGCTATCTACGCCCTGATACCAAGA AACGCACGACACTCTCCTTTGGCAGCTATCCAGCCTTATCGTTGGCCGAAGCAAGACAGCTACGGGCAGAACATTTAGCC CTGCTGGCAAAAGGCATAGATCCACAGCAAAAAGTGGCGAAAGAAGAGGAAGAAGCACAAATCGCGGTAGAAAGCATCTT CATCAATGTGGCGCGTAACTGGTTCACACTAAAACAGACAAAGGTCAGTGCAGATCACGCCAAAGACATTTGGCGATCGC TGGAAAAAGACGTGCTCCCGGCGATTGAGAATATCCCGGTACAGGAAATCAAAGCCCGCACGTTGATACAGGCGCTAGAG CCGATTAAAGCCCGTGGCGCACTAGAAACCGTCAGGCGGTTAGTACAGCGCATTAACGAAATCATGGTTTACGCGGTCAA TACGGGGCTGATTGACGCTAACCCAGCCTCTGGCATTGGTATGGCCTTTGAGCGCCCGAAAAAGCAGCATATGCCGACTA TCAGGCCAGAAGAGATACCCAAGCTAATGCGTACCATTGCTATGTCTAACCTGTCCATTCCAACCCGTTGCTTATTAGAA TGGCAGCTACTGACGCTGATTCGCCCGGCAGAAGCCTCCGCGACGGCATGGGCAGAGATCGATATTGAGAAAAGAACGTG GAGCATTCCGGCTGAACGTATGAAAGCCAAGCGTGATCATATCGTTCCGCTCTCCGATCAGGCGCTGGAACTACTCGACA TCATGCGCCCTATCAGCGGCAACCGGGAACATGTATTCCCCAGCCGCAACGATCCTAAAAAACCCATGAACAGCCAGACC GCAAATGCAGCATTAAAACGCATAGGCTACGGTGGAAAACTGGTCGCACATGGTTTACGCTCGATAGCCAGCACCGCCAT GAATGAAGCCGGTTTTAATCCCGATGTGATTGAAGCTGCATTAGCTCATATTGAAAGTAATGATGTTAGAAAAGCCTATA ACCGCTCAACCTATCTAGAGCATCGCAAAGAATTGATGGACTGGTGGGGTATGCAGTGTACTTCTGCAAAATATGAGGCT GTTAGATAG Protein sequence : MPRIARPLTHTEVSKARTPDKELSLHDGDGLFLLIKPSGKKLWRFRYLRPDTKKRTTLSFGSYPALSLAEARQLRAEHLA LLAKGIDPQQKVAKEEEEAQIAVESIFINVARNWFTLKQTKVSADHAKDIWRSLEKDVLPAIENIPVQEIKARTLIQALE PIKARGALETVRRLVQRINEIMVYAVNTGLIDANPASGIGMAFERPKKQHMPTIRPEEIPKLMRTIAMSNLSIPTRCLLE WQLLTLIRPAEASATAWAEIDIEKRTWSIPAERMKAKRDHIVPLSDQALELLDIMRPISGNREHVFPSRNDPKKPMNSQT ANAALKRIGYGGKLVAHGLRSIASTAMNEAGFNPDVIEAALAHIESNDVRKAYNRSTYLEHRKELMDWWGMQCTSAKYEA VR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| VC0516 | NP_230167.1 | phage integrase | Not tested | VSP-2 | Protein | 2e-103 | 52 |
| int | AAK20773.1 | integrase | Not tested | VPI | Protein | 4e-103 | 52 |
| int | AAK20803.1 | integrase | Not tested | VPI | Protein | 4e-103 | 52 |
| unnamed | AAA82714.1 | integrase | Not tested | VPI | Protein | 4e-103 | 52 |
| VC0847 | NP_230494.1 | phage family integrase | Not tested | VPI-1 | Protein | 5e-103 | 52 |
| VC0395_A0372 | YP_001216328.1 | phage family integrase | Not tested | VPI-1 | Protein | 5e-103 | 52 |
| VPI2_0001 | ACA01818.1 | phage family integrase | Not tested | VPI-2 | Protein | 2e-87 | 46 |
| VC1758 | NP_231394.1 | phage family integrase | Not tested | VPI-2 | Protein | 1e-86 | 46 |
| VC0395_A1357 | YP_001217300.1 | phage family integrase | Not tested | VPI-2 | Protein | 1e-86 | 46 |
| int | AAD44730.1 | Int | Not tested | SHI-2 | Protein | 3e-64 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| PC1_0723 | YP_003016313.1 | integrase family protein | VFG1092 | Protein | 6e-87 | 46 |
