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Name : PC1_0649 (PC1_0649) Accession : YP_003016240.1 Strain : Pectobacterium carotovorum PC1 Genome accession: NC_012917 Putative virulence/resistance : Virulence Product : lysyl-tRNA synthetase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG1190 EC number : - Position : 752253 - 753770 bp Length : 1518 bp Strand : + Note : TIGRFAM: lysyl-tRNA synthetase; PFAM: tRNA synthetase class II (D K and N); nucleic acid binding OB-fold tRNA/helicase-type; KEGG: eca:ECA0774 lysyl-tRNA synthetase DNA sequence : ATGGCTGAATCACAATCACAGGGTGCCGATCAGGCGCAGGATCTGAATAACGAATTAAAAACGCGTCGTGAGAAGCTGGT GGCGCTGCGTGAAACCGGGATCGCATTCCCGAATGATTTCCGCCGTGACAGCACGTCCGATCGTCTGCACGCTGAGTTCG ATGGCAAAGAGAACGAAGAGCTGGAAGAACTGGGCGTTGAAGTGACCGTGGCGGGCCGTATGATGACCCGTCGCATCATG GGTAAAGCCTCTTTTGTGACCTTGCAGGACGTCGGTGGCCGTATTCAGCTGTATGTTTCCCGCGACGATCTGGCGGAAGG CATCTATAACGAGCAGTTCAAGAAGTGGGATCTGGGCGATATTCTGGGCGCACGCGGTAAGCTGTTCAAAACCAAAACTG GCGAGTTGTCTATCCACTGCACCGAACTGCGTCTGCTGACTAAAGCGCTGCGTCCGCTGCCGGATAAATTCCACGGCCTT GCCGATCAGGAAACCCGCTATCGTCAGCGCTATCTGGATCTGATCGCTAACGACGAATCTCGCAATACCTTCCGTATTCG TTCCAAAGTGATGGCGGCGATCCGTAGCTTTATGGTCGATCACGGCTTCATGGAAGTTGAAACACCGATGATGCAGGTGA TCCCAGGCGGTGCATCTGCCCGTCCGTTCATCACGCACCATAACGCGCTGGACATCGATATGTACCTGCGTATTGCGCCG GAACTGTACCTGAAGCGTCTGGTCGTTGGTGGCTTCGAGCGTGTGTTCGAAATCAACCGTAACTTCCGTAACGAAGGCGT TTCCCCACGTCACAACCCTGAATTCACCATGATGGAACTTTATATGGCGTATGCCGATTATAAAGACCTGATTGTGTTGA CGGAAAACCTGTTCCGTACACTGACGCAGGACGTGCTGGGCTCGACGACGGTTGAATATGGCGACCAGACATTCGACTTC GGTAAGCCGTTCGAGAAGCTGACGATGCGTGAAGCGATCTGCAAATACCGTCCTGAAACCAACGTCGCCGATCTGGACGA TCTGGAGAAAGCGACTGCGATCGCTCAGTCTCTGGGGATAAAGATCGAGAAAAGTTGGGGGCTGGGCCGTATCGTTACCG AGATCTTCGAAGAGACGGCAGAAAGCAGCCTGATCCAACCGACCTTCATCACTGAATATCCAGCTGAAGTGTCGCCGTTG GCGCGTCGTAACGATCAGAACCCAGAAATCACCGACCGCTTTGAGTTCTTCATCGGCGGGCGTGAAATCGGTAACGGCTT CTCCGAGCTGAATGATGCCGAAGATCAGGCAGAGCGTTTTGCTCAGCAGGTGAATGCGAAAGACGCGGGCGATGACGAAG CGATGTTCTACGACGAAGACTACGTGACGGCGCTGGAACACGGCCTGCCGCCGACTGCGGGTCTGGGTATCGGTATCGAC CGTATGGTGATGTTGTTCACTAACAGCCACACCATCCGCGACGTGATCCTGTTCCCGGCGATGCGTCCACAGAAATAA Protein sequence : MAESQSQGADQAQDLNNELKTRREKLVALRETGIAFPNDFRRDSTSDRLHAEFDGKENEELEELGVEVTVAGRMMTRRIM GKASFVTLQDVGGRIQLYVSRDDLAEGIYNEQFKKWDLGDILGARGKLFKTKTGELSIHCTELRLLTKALRPLPDKFHGL ADQETRYRQRYLDLIANDESRNTFRIRSKVMAAIRSFMVDHGFMEVETPMMQVIPGGASARPFITHHNALDIDMYLRIAP ELYLKRLVVGGFERVFEINRNFRNEGVSPRHNPEFTMMELYMAYADYKDLIVLTENLFRTLTQDVLGSTTVEYGDQTFDF GKPFEKLTMREAICKYRPETNVADLDDLEKATAIAQSLGIKIEKSWGLGRIVTEIFEETAESSLIQPTFITEYPAEVSPL ARRNDQNPEITDRFEFFIGGREIGNGFSELNDAEDQAERFAQQVNAKDAGDDEAMFYDEDYVTALEHGLPPTAGLGIGID RMVMLFTNSHTIRDVILFPAMRPQK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | CAD66193.1 | putative lysil-tRNA synthetase LysU | Not tested | PAI III 536 | Protein | 7e-168 | 68 |
| lysS | YP_005163386.1 | lysyl-tRNA synthetase | Not tested | Not named | Protein | 8e-90 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| PC1_0649 | YP_003016240.1 | lysyl-tRNA synthetase | VFG1668 | Protein | 4e-168 | 68 |
